Job Description P32719 Confidence 98.23% Date Thu Jan 5 11:50:42 GMT 2012 Rank 146 Aligned Residues 197 % Identity 17% Template d1n55a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 0.83

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																																			.	.	.	.	.
Query SS confidence																																																																			.	.	.	.	.
Query Sequence		M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	.	.	.	.	.	I	A	Q	L	A	R	A	G	A	D
Query Conservation																																																																			.	.	.	.	.
Alig confidence																												.	.	.									.																												.	.	.	.	.
Template Conservation																												.	.	.									.
Template Sequence		C	N	G	T	T	A	S	I	E	K	L	V	Q	V	F	N	E	H	T	I	S	H	D	V	Q	C	.	.	.	V	V	A	P	T	F	V	H	.	I	P	L	V	Q	A	K	L	R	N	P	K	Y	V	I	S	A	Q	N	A	I	A	K	S	G	A	F	T	G	E	V	S	M	P	I	L	K	D	I	G	V	H
Template Known Secondary structure		S																	S				S					.	.	.						G	G	G	.											T	T						S			B	S	S		S	S		T	T			B								T
Template Predicted Secondary structure																												.	.	.									.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		83	.	.	.		.	.	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.								.	.	.	.	.	.	.	140
Predicted Secondary structure						.				.	.	.	.	.	.																									.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query SS confidence						.				.	.	.	.	.	.																									.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Query Sequence		F	I	T	L	.	H	P	E	.	.	.	.	.	.	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	.	.	.	.	.	.	.	.	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	.	.	.	.	.	.	.	T	V	M	T	V	D	P	G
Query Conservation						.				.	.	.	.	.	.																									.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Alig confidence						.				.	.	.	.	.	.																									.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		W	V	I	L	G	H	S	E	R	R	T	Y	Y	G	E	T	D	E	I	V	A	Q	K	V	S	E	A	C	K	Q	G	F	M	V	I	A	C	I	G	E	T	L	Q	Q	R	E	A	N	Q	T	A	K	V	V	L	S	Q	T	S	A	I	A	A	K	L	T	K	D	A	W	N	Q	V	V	L	A	Y	E	P	V
Template Known Secondary structure						S								S																	T	T																T	T															T	T			G	G	G	G	G	G								G
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		141				.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure			.	.	.																.											.	.	.	.	.																						.
Query SS confidence			.	.	.																.											.	.	.	.	.																						.
Query Sequence		F	.	.	.	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	.	L	K	A	W	R	E	R	E	G	L	.	.	.	.	.	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	.	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W
Query Conservation			.	.	.																.											.	.	.	.	.																						.
Alig confidence			.	.	.																.											.	.	.	.	.																						.													.	.				.
Template Conservation																																																																							.	.				.
Template Sequence		W	A	I	G	T	G	K	V	A	T	P	E	Q	A	Q	E	V	H	L	L	L	R	K	W	V	S	E	N	I	G	T	D	V	A	A	K	L	R	I	L	Y	G	G	S	V	N	A	A	N	A	A	T	L	Y	A	K	P	D	I	N	G	F	L	V	G	G	A	S	L	.	.	K	P	E	.	F	R	D	I	I
Template Known Secondary structure		G	G	S	S	S	S																							T														S	S			T	T	T						T	S	T	T							S	G	G	G	G	.	.	S	T	T	.
Template Predicted Secondary structure																																																																							.	.				.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.			.	240	.		.	.	.	.	.
		211
Predicted Secondary structure
Query SS confidence
Query Sequence		R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		247

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions