Job Description P32719 Confidence 98.03% Date Thu Jan 5 11:50:42 GMT 2012 Rank 165 Aligned Residues 198 % Identity 18% Template d1mo0a_ SCOP info TIM beta/alpha-barrel Triosephosphate isomerase (TIM) Triosephosphate isomerase (TIM) Resolution 1.70

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.						.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																																									.											.	.	.	.	.
Query SS confidence																																																									.											.	.	.	.	.
Query Sequence		M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	.	H	L	M	V	T	R	P	Q	D	Y	.	.	.	.	.	I	A	Q	L	A	R	A	G	A
Query Conservation																																																									.											.	.	.	.	.
Alig confidence																												.	.	.																		.	.								.											.	.	.	.	.
Template Conservation																												.	.	.																		.	.
Template Sequence		M	N	G	D	Y	A	S	V	D	G	I	V	T	F	L	N	A	S	A	D	N	S	S	V	D	V	.	.	.	V	V	A	P	P	A	P	Y	L	A	Y	A	K	S	K	L	K	.	.	A	G	V	L	V	A	A	Q	N	C	Y	K	V	P	K	G	A	F	T	G	E	I	S	P	A	M	I	K	D	L	G	L
Template Known Secondary structure		S																	S				T	T				.	.	.						G	G	G								S		.	.	T	T						S				S	S	S	S	S	S		T	T										T	T
Template Predicted Secondary structure																												.	.	.																		.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		82	.	.	.	.		.	.	.	90							.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.												120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.
Predicted Secondary structure							.					.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query SS confidence							.					.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Query Sequence		D	F	I	T	L	.	H	P	E	T	.	.	.	.	.	.	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	.	.	.	.	.	.	.	.	.	.	.	E	A	M	K	Y	Y	I	H	K	A	D	.	.	.	.	.	K	I	T	V	M	T	V	D
Query Conservation							.					.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Alig confidence							.					.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation
Template Sequence		E	W	V	I	L	G	H	S	E	R	R	H	V	F	G	E	S	D	A	L	I	A	E	K	T	V	H	A	L	E	A	G	I	K	V	V	F	C	I	G	E	K	L	E	E	R	E	A	G	H	T	K	D	V	N	F	R	Q	L	Q	A	I	V	D	K	G	V	S	W	E	N	I	V	I	A	Y	E	P	V	W
Template Known Secondary structure							S							T	S																	T	T																T	T															T	T	T			S	T	T								G	G
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.						.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure																				.											.	.	.	.	.																						.
Query SS confidence																				.											.	.	.	.	.																						.
Query Sequence		P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	.	L	K	A	W	R	E	R	E	G	L	.	.	.	.	.	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	.	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R
Query Conservation																				.											.	.	.	.	.																						.
Alig confidence																				.											.	.	.	.	.																						.													.	.				.
Template Conservation																																																																						.	.				.
Template Sequence		A	I	G	T	G	K	T	A	S	G	E	Q	A	Q	E	V	H	E	W	I	R	A	F	L	K	E	K	V	S	P	A	V	A	D	A	T	R	I	I	Y	G	G	S	V	T	A	D	N	A	A	E	L	G	K	K	P	D	I	D	G	F	L	V	G	G	A	S	L	.	.	K	P	D	.	F	V	K	I	I	N
Template Known Secondary structure		G	T	T	T	S																							T								S						S	S			T	T	T					T	T	S	T	T							S	G	G	G	G	.	.	S	T		.
Template Predicted Secondary structure																																																																						.	.				.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.			.	.	.		.	240	.	.	.	.
		212	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		245	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions