Job Description P32719 Confidence 97.53% Date Thu Jan 5 11:50:42 GMT 2012 Rank 228 Aligned Residues 153 % Identity 12% Template d1gk8a1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.4

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70
Predicted Secondary structure																							.																																.	.	.											.	.	.	.	.								.	.
Query SS confidence																							.																																.	.	.											.	.	.	.	.								.	.
Query Sequence		K	I	S	P	S	L	M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	.	.	.	K	L	A	T	K	P	L	D	C	H	.	.	.	.	.	L	M	V	T	R	P	Q	.	.
Query Conservation																							.																																.	.	.											.	.	.	.	.								.	.
Alig confidence																							.												.	.	.	.	.	.	.	.													.	.	.											.	.	.	.	.								.	.
Template Conservation																																			.	.	.	.	.	.	.	.
Template Sequence		K	G	H	Y	L	N	A	T	A	G	T	C	E	E	M	M	K	R	A	V	A	K	E	L	G	V	P	I	I	M	H	D	Y	.	.	.	.	.	.	.	.	L	T	G	G	F	T	A	N	T	S	L	A	I	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M	H	A	V	I	D	R	Q	R	N	H	G
Template Known Secondary structure			B								S	S											T	T	T	T		S							.	.	.	.	.	.	.	.																			T								T	T						S		S	S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.									.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
						71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.																	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																							.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																							.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	.	.	.	.	.	G	Q	A	F	R	L	I	D	E	I	R	R	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	M	K	V	G	L	I	L	N	P	E	T	P	V	E	A	M	K	Y	Y
Query Conservation		.	.	.	.																							.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																							.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	H	F	R	V	L	A	K	A	L	R	M	S	G	G	D	H	L	H	S	G	T	V	V	G	K	L	E	G	E	R	E	V	T	L	G	F	V	D	L	M	R	D	D	Y	V	E	K	D	R	S	R	G	I	Y	F	T	Q	D	W	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																	S							S	S	S	S	S																	S					B	G	G	G	T	B		S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	.	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E
Query Conservation																																																														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	P	G	V	M	P	V	A	S	G	G	I	H	V	W	H	M	P	A	L	V	E	I	F	G	D	D	A	C	L	Q	F	G	G	G	T	L	G	H	P	W
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S	S			G	G	G										S	S	S					S					T	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																									371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		N	I	D	E	A	W	R	I	M	T	A	Q	I	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	N	A	P	G	A	A	A	N	R	V	A	L	E	A	C
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions