Job Description P32719 Confidence 99.95% Date Thu Jan 5 11:50:42 GMT 2012 Rank 18 Aligned Residues 208 % Identity 15% Template c3thaB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: tryptophan synthase subunit alpha from campylobacter jejuni. Resolution 2.37 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.					.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																		.	.	.	.	50	.	.	.	.		.	.	.	.	.	60
Predicted Secondary structure																						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		I	S	P	S	L	M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	.	.	.	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	F	V	S	Q	V	K	K	.	L	A	T	K	P	L
Query Conservation																						.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence												.										.	.	.	.												.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation												.																									.	.	.
Template Sequence		N	V	A	Y	T	V	L	G	Y	P	.	N	L	Q	T	S	E	A	F	L	Q	R	L	D	Q	S	P	I	D	I	L	E	L	G	V	.	.	.	A	Y	S	D	P	I	A	D	G	E	I	I	A	D	A	A	K	I	A	L	D	Q	G	V	D	I	H	S	V	F	E	L	L	A	R	I	K	T	K	K	A	L
Template Known Secondary structure								T	T	S	S	.											T	G	G	G	S	S		S							.	.	.		S	S					S	S													T	T												T				S	S
Template Predicted Secondary structure												.																									.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.						.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		D	C	H	L	M	V	T	.	.	.	.	.	R	P	Q	D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.																				.
Template Conservation																																	.
Template Sequence		V	F	X	V	Y	Y	N	L	I	F	S	Y	G	L	E	K	F	V	K	K	A	K	S	L	G	I	C	A	L	I	V	.	P	E	L	S	F	E	E	S	D	D	L	I	K	E	C	E	R	Y	N	I	A	L	I	T	L	V	S	V	T	T	P	K	E	R	V	K	K	L	V	K	H	A	K	G	F	I	Y	L
Template Known Secondary structure																									T	T							.	T	T			G	G	G												T									T	T	S										T	T			S
Template Predicted Secondary structure																																	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																																																																		.
Query SS confidence																																																																		.
Query Sequence		T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	.	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T
Query Conservation																																																																		.
Alig confidence												.	.																			.																																		.
Template Conservation												.	.																			.
Template Sequence		L	A	S	I	G	I	T	G	T	K	.	.	S	V	E	E	A	I	L	Q	D	K	V	K	E	I	R	S	F	T	.	N	L	P	I	F	V	G	F	G	I	Q	N	N	Q	D	V	K	R	X	R	K	V	A	D	G	V	I	V	G	T	S	I	V	K	C	F	K	Q	G	N	L	D	I	I	X	K	D	I	E
Template Known Secondary structure					S		S	S				.	.																T	T		.		S						S	S			S	S							T	T	T	S	S												T	T	S	S
Template Predicted Secondary structure												.	.																			.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		215	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	I	F	K
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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