Job Description P32719 Confidence 97.58% Date Thu Jan 5 11:50:42 GMT 2012 Rank 223 Aligned Residues 88 % Identity 14% Template c3tdmD_ PDB info PDB header:de novo protein Chain: D: PDB Molecule:computationally designed two-fold symmetric tim-barrel PDBTitle: computationally designed tim-barrel protein, halfflr Resolution 2.40 Å

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		117	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure														.																																																	.
Query SS confidence														.																																																	.
Query Sequence		T	P	V	E	A	M	K	Y	Y	I	H	K	.	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	.	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V
Query Conservation														.																																																	.
Alig confidence														.																													.	.	.	.	.	.	.	.													.
Template Conservation																																											.	.	.	.	.	.	.	.
Template Sequence		L	L	R	D	W	V	V	E	V	E	K	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	S	G	Y	D	T	E	M	I	R	F	V	R	P	.	.	.	.	.	.	.	.	L	T	T	L	P	I	I	A	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	R	G	A	D	K	V	S	I
Template Known Secondary structure													T	T		S							S	S	S		S	S	S	S											G	G	.	.	.	.	.	.	.	.	G			S						S				S										T	T		S
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.									.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M
Query Conservation
Alig confidence					.
Template Conservation					.
Template Sequence		N	T	A	.	A	V	E	N	P	S	L	I	T	Q	I	A	Q	T	F
Template Known Secondary structure		S			.					T								T	T
Template Predicted Secondary structure					.
Template SS confidence
		103	.	.		.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions