Job Description P32719 Confidence 88.60% Date Thu Jan 5 11:50:42 GMT 2012 Rank 379 Aligned Residues 187 % Identity 14% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																								.	.	.	.										.	.												.	.	.
Query SS confidence																.																								.	.	.	.										.	.												.	.	.
Query Sequence		C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	.	.	.	.	P	F	F	V	S	Q	V	K	K	.	.	L	A	T	K	P	L	D	C	H	L	M	.	.	.	V	T	R	P	Q	D	Y	I	A	Q	L	A	R
Query Conservation																.																								.	.	.	.										.	.												.	.	.
Alig confidence																.											.	.	.											.	.	.	.										.	.												.	.	.
Template Conservation																											.	.	.
Template Sequence		A	I	D	E	K	A	F	C	N	F	V	E	W	Q	I	T	Q	G	I	N	G	V	S	P	V	.	.	.	G	T	T	G	E	S	P	T	L	T	H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	K	R	V	P	V	V	A	G	A	G	S	N	S	T	S	E	A	V	E	L	A	K	H	A	E	K
Template Known Secondary structure			B															T	T		S					S	.	.	.	S	T	T	T	T	G	G	G																		T	T	S	S		B							S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.				.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.					.	90	.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.															.															.	.	.	.	.
Query SS confidence												.	.	.	.															.															.	.	.	.	.
Query Sequence		A	G	A	D	F	I	T	L	H	P	.	.	.	.	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	.	R	R	H	D	M	K	V	G	L	I	L	N	P	E	.	.	.	.	.	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P
Query Conservation												.	.	.	.															.															.	.	.	.	.
Alig confidence												.	.	.	.															.															.	.	.	.	.														.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.
Template Sequence		A	G	A	D	A	V	L	V	V	T	P	Y	Y	N	R	P	N	Q	R	G	L	Y	T	H	F	S	S	I	A	K	A	I	S	I	P	I	I	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	E	T	M	R	D	L	C	R	D	F	.	.	.	.	.	.	.	.	.	K	N	I	I	G	V	K	D	A	T
Template Known Secondary structure		T	T		S									S	S																			S	S												S	S															.	.	.	.	.	.	.	.	.	T	T								S
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.										160	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L
Query Conservation
Alig confidence															.	.	.	.	.										.																								.	.	.	.	.
Template Conservation															.	.	.	.	.										.																								.	.	.	.	.
Template Sequence		G	K	I	E	R	A	S	E	Q	R	E	K	C	.	.	.	.	.	G	K	D	F	V	Q	L	S	G	.	D	D	C	T	A	L	G	F	N	A	H	G	G	V	G	C	I	S	V	S	S	N	V	.	.	.	.	.	A	P	K	L	C	A	Q	L	H	A	A	C	L	C
Template Known Secondary structure				T											.	.	.	.	.		T	T	S					S	.		T	T	T								T							S	G	G	G	T	.	.	.	.	.														T
Template Predicted Secondary structure															.	.	.	.	.										.																								.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.						.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.						.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions