Return to main results Retrieve Phyre Job Id

Job DescriptionP32719
Confidence99.97%DateThu Jan 5 11:50:42 GMT 2012
Rank15Aligned Residues206
% Identity13%Templatec3ru6C_
PDB info PDB header:lyaseChain: C: PDB Molecule:orotidine 5'-phosphate decarboxylase; PDBTitle: 1.8 angstrom resolution crystal structure of orotidine 5'-phosphate2 decarboxylase (pyrf) from campylobacter jejuni subsp. jejuni nctc3 11168
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60...... ...70......
Predicted Secondary structure 























....

Query SS confidence 

































































. . . .









Query Sequence  MKISPSLMCMDLLKFKEQIEFIDSHADYFHIDIMDGHFVPNLTLSPFFVSQVKKLATKPLDCHLMV. . . . TRPQDYIAQL
Query Conservation   

 


 
 
   
   
   
 
 
 




 

 


 
  
   
  

      




  ....  
   
   
Alig confidence 






...
















..




































....









Template Conservation 
 
 


...
       
 
      .. 
  

 
       
   
  
       
  
 
  


          
Template Sequence  MKLCVAL. . . DLSTKEECLQLAKELKN. . LDIWLKVGLRAYLRDGFKFIEELKKVDDFKIFLDLKFHDIPNTMADACEEV
Template Known Secondary structure 

...

SSTTT..SS





S
Template Predicted Secondary structure 

...





..













Template SS confidence 















































































   1...... ..10.........20.... .....30.........40.........50.........60.........70.....
 
   77..80.........90.........100.........110.. .......120........ .130.........140.........150.
Predicted Secondary structure 











...




..











Query SS confidence 



































. . .















. .






















Query Sequence  ARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLI. . . LNPETPVEAMKYYIHK. . ADKITVMTVDPGFAGQPFIPEML
Query Conservation    



 
 

 
         
   
  
 
  
 ...
 
 
           .. 
 

   
  
  
        
Alig confidence 



































...















..






















Template Conservation     


 


    
   
      
        
  
                      
          
  
     
Template Sequence  SKLGVDMINIHASAGKIAIQEVMTRLSKFSKRPLVLAVSALTSFDEENFFSIYRQKIEEAVINFSKISYENGLDGMVCSV
Template Known Secondary structure  TTT
SGGG
TTSSS


S
TT

SS
TT



T
Template Predicted Secondary structure 


























Template SS confidence 















































































   76...80.........90.........100.........110.........120.........130.........140.........150.....
 
   152.......160.........170......... 180.........190.........200.........210.......
Predicted Secondary structure 








..










Query SS confidence 



























. .





































Query Sequence  DKLAELKAWREREGLEYEIEVDGSCNQA. . TYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQI
Query Conservation   

  
            
 




   .. 
      


 





 

        
       
Alig confidence 








....














..



















..















Template Conservation       

  ....     
 
  

             


 






 .. 
 

  

      
Template Sequence  FESKKIKEH. . . . TSSNFLTLTPGIRPFGANLAMARENLSDYIVVGRPIY. . KNENPRAVCEKILNKI
Template Known Secondary structure  TT....S
TTS
S

TT


TT
S
..TSS
Template Predicted Secondary structure 

....



















..



Template SS confidence 



































































   156...160.... .....170.........180.........190.........200. ........210.......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions