Job Description P32719 Confidence 89.05% Date Thu Jan 5 11:50:42 GMT 2012 Rank 375 Aligned Residues 223 % Identity 11% Template c3qxbB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:putative xylose isomerase; PDBTitle: crystal structure of a putative xylose isomerase (yp_426450.1) from2 rhodospirillum rubrum atcc 11170 at 1.90 a resolution Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.																															.																.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.																															.																.	.	.	.	.	.	.	.	.	.
Query Sequence		I	S	P	S	L	M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	D	S	.	.	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	.	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	.	.	.	.	.	.	.	.	.	.
Query Conservation																								.	.																															.																.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.																															.																.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	L	C	F	A	V	K	R	W	L	E	P	D	R	L	A	G	L	V	R	D	D	L	G	L	E	Y	V	Q	Y	T	Y	D	L	T	D	P	W	W	P	D	I	E	R	D	R	R	A	I	A	Y	A	K	A	F	R	K	A	G	L	T	I	E	S	T	F	G	G	L	A	S	Y	T	Y	N	H	F	L	A
Template Known Secondary structure				G	G	G	G	T	T	T	S		S											T	T									T	T	T	S		T	T	S																			T	T														T	S		B	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
															70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																			.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	Q	D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	R	L	I	D	E	I	R	R	H	D	M	K	.	V	G	L	I	L	N	P	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.								.	.
Template Conservation
Template Sequence		P	T	L	E	L	Q	S	L	G	Y	Q	H	L	K	R	A	I	D	X	T	A	A	X	E	V	P	A	T	G	X	P	F	G	S	Y	S	A	A	D	A	L	N	P	A	R	R	E	E	I	Y	A	I	A	R	D	X	W	I	E	L	A	A	Y	A	K	R	Q	G	L	S	X	L	Y	V	E	P	V	P	L	A
Template Known Secondary structure		S	S																					T	T		S							B	B							T																											T										S		T
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
					116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.					.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.														.	.	.	.
Predicted Secondary structure		.	.	.																		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	.	.	.	.	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	G	S
Query Conservation		.	.	.																		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	E	F	P	S	S	A	A	D	A	A	R	L	X	A	D	L	D	G	R	T	E	I	P	V	R	L	L	V	D	W	G	H	A	L	F	E	P	L	F	G	P	E	A	D	X	D	H	W	X	D	L	C	Q	P	W	I	A	A	Y	H	I	Q	Q	T	D	G	Q	L	D	R	H	W	S	F	T	Q	P	G	V
Template Known Secondary structure		T	B	S	S		S												T	T	T	S	S	S												T						G	G	G		S									G	G	G								B			S	S	S				B		T	T	S		S	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		176	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure				.
Query SS confidence				.
Query Sequence		C	N	.	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L	A	A	K	S	E	V	Q
Query Conservation				.
Alig confidence				.
Template Conservation
Template Sequence		V	T	P	Q	R	L	Q	D	F	W	D	K	Y	A	L	T	D	Q	T	F	F	A	E	I	L	Y	P	F	E	A	R	D	E	D	V	L	A	D	X	I	A	S	V	K	A	L	K	A	A	S	P
Template Known Secondary structure														T	T		S	S											T	T	S																		T
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions