Job Description P32719 Confidence 98.87% Date Thu Jan 5 11:50:42 GMT 2012 Rank 86 Aligned Residues 204 % Identity 18% Template c3qw4B_ PDB info PDB header:transferase, lyase Chain: B: PDB Molecule:ump synthase; PDBTitle: structure of leishmania donovani ump synthase Resolution 3.00 Å

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		4	.	.	.	.	.	10	.										.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.																																													.	.	.	.	.														.
Query SS confidence										.	.	.	.	.	.	.	.	.																																													.	.	.	.	.														.
Query Sequence		S	P	S	L	M	C	M	D	.	.	.	.	.	.	.	.	.	L	L	K	F	K	E	Q	I	E	F	I	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	L	.	.	.	.	.	A	T	K	P	L	D	C	H	L	M	V	T	R	.
Query Conservation										.	.	.	.	.	.	.	.	.																																													.	.	.	.	.														.
Alig confidence										.	.	.	.	.	.	.	.	.																							.	.	.				.	.															.	.	.	.	.														.
Template Conservation																																									.	.	.				.	.
Template Sequence		S	L	L	C	V	G	L	D	P	R	A	K	T	A	A	A	A	V	E	E	C	K	R	L	I	E	Q	T	H	E	Y	A	A	A	Y	K	P	N	A	.	.	.	A	F	F	.	.	E	F	F	G	A	E	G	W	A	A	L	S	E	V	I	R	A	V	P	A	G	I	P	V	V	L	D	A	K	R	G	D	I
Template Known Secondary structure													S	S																G	G	G		S					B		.	.	.				.	.		T	T														T	S		T	T	S		B
Template Predicted Secondary structure																																									.	.	.				.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
					69	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.								.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.								.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	P	Q	D	Y	I	A	Q	.	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	M	K	Y	Y	I	H	K	A
Query Conservation		.	.	.								.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.								.																									.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.
Template Sequence		A	D	T	A	D	A	Y	A	T	S	A	F	K	H	L	N	A	H	A	I	T	A	S	P	Y	M	G	S	D	S	L	Q	P	F	M	.	.	.	R	Y	P	D	K	A	V	F	V	L	C	K	T	S	N	K	G	S	N	D	L	Q	C	L	R	V	G	D	R	Y	L	Y	E	A	V	A	E	R	A	E	G	P
Template Known Secondary structure														T	T	S			S						S	T	T										.	.	.	T		T	T	S									S	S	G	G	G	G	G	T	T	T	S			T	T												T	T	T
Template Predicted Secondary structure																																					.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.				.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190							.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																							.																									.	.	.	.	.	.
Query SS confidence																																							.																									.	.	.	.	.	.
Query Sequence		D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	.	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	.	.	.	.	.	.	V	F	I	V	G	T	S	G	L	F	N	H
Query Conservation																																							.																									.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.																														.										.	.	.	.												.	.	.	.	.	.										.	.
Template Conservation				.	.	.	.	.	.																																								.	.	.	.																											.	.
Template Sequence		W	N	.	.	.	.	.	.	V	N	G	N	V	G	L	V	V	G	A	T	D	P	V	A	L	A	R	V	R	A	R	A	P	T	L	W	F	L	V	P	G	I	G	A	Q	G	G	.	.	.	.	S	L	K	A	S	L	D	A	G	L	R	A	D	G	S	G	M	L	I	N	V	S	R	G	L	A	.	.	R
Template Known Secondary structure		T		.	.	.	.	.	.	T	T	S								T	T													S	S								S	S	T	T			.	.	.	.												T	T	S								S					.	.	S
Template Predicted Secondary structure				.	.	.	.	.	.																																								.	.	.	.																											.	.
Template SS confidence
		166	.							.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.					.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L	A	A	K	S	E	V	Q	P	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	D	P	R	A	A	A	K	E	L	C	E	E	I	N	A	I	R	F	A	K	G	A	S
Template Known Secondary structure			S																		S			S
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions