Job Description P32719 Confidence 98.37% Date Thu Jan 5 11:50:42 GMT 2012 Rank 123 Aligned Residues 173 % Identity 16% Template c3oixA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative dihydroorotate dehydrogenase; dihydroorotate PDBTitle: crystal structure of the putative dihydroorotate dehydrogenase from2 streptococcus mutans Resolution 2.40 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.											.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																.	.	.																	.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																																.	.	.																	.	.	.	.	.	.	.	.	.	.											.
Query Sequence		F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	I	A	Q	L	.	.	.	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	.	.	.	.	.	.	.	.	.	.	G	Q	A	F	R	L	I	D	E	I	.	R	R	H	D	M	K	V	G	L	I
Query Conservation																																.	.	.																	.	.	.	.	.	.	.	.	.	.											.
Alig confidence																																.	.	.																	.	.	.	.	.	.	.	.	.	.											.
Template Conservation
Template Sequence		Y	V	T	E	L	Q	K	Q	P	D	S	K	N	H	F	L	S	L	V	G	M	S	P	E	E	T	H	T	I	L	M	V	E	A	S	K	Y	Q	G	L	V	E	L	N	L	S	C	P	N	V	P	G	P	Q	I	A	Y	D	F	E	T	T	D	Q	I	L	S	E	V	F	T	Y	F	T	K	P	L	G	I	K
Template Known Secondary structure									S	T	T											S	S										T	T	T	S	S			S							S				S					G	G	G													T	T	T			S
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.					.	130	.	.	.	.																.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																		.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	.	.	.	.	A	D	K	I	T	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D
Query Conservation																		.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	P	P	Y	F	D	I	V	H	F	D	Q	A	A	A	I	F	N	Y	P	L	T	F	V	N	C	I	N	S	I	G	N	G	L	V	I	E	D	E	T	V	V	I	P	K	N	G	F	G	G	I	G	G	D	Y	V	K	P	T	A	L	A	N	V	H	A	F	Y	K	R	L	N	P	S	I	Q	I	I	G	T
Template Known Secondary structure																							S																T	T						G	G	G							G	G	G													T	T	S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	G	V	T	G	R	D	A	F	E	H	I	L	C	G	A	S	M	V	Q	I	G	T	A	L	H	Q	E	G	P	Q	I	F	K	R	I	T	K	E	L	A	I	M	T	E	K
Template Known Secondary structure		S														T		S					S								T
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions