|   |
16 | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
|
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | |
|
. | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . |
|
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|  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  | . | . |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . |
Query SS confidence |   |
|
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| . |
. |
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| . |
. |
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| . |
Query Sequence |   |
K | E | Q | I | E | F | I | D | S | H | A | D | Y | F | H | I | D | I | . |
. |
M | D | G | H | F | V | P | N | L | T | L | S | P | F | F | V | S | Q | V | K | K | L | A | T | K | P | L | D | C | H | L | M | . |
. |
V | T | R | P | Q | D | Y | I | A | Q | L | A | R | A | G | A | D | F | I | T | L | H | P | E | T | . |
Query Conservation |   |
  |   |   |
|   |   |   |
|   |
|   |
|   |
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| . | . |   |
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|   |
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|   |
|   |   |
|   |   |   |
|   |   |
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|   |   |   |   |   |   |
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|   | . | . |   |   |   |
|   |   |   |
|   |   |   |   |   |
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|   |
|   |
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|   |
|   | . |
Alig confidence |   |
|
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| . | . |
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| . | . |
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| . |
Template Conservation |   |
  |   |
|   |   |
|   |   |
|
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|
|   |
|
|
|
|   |
|
|   |   |
|   |   |
|   |
|   |   |   |
|   |
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|
|   |   |
|
|   |   |   |   |   |   |
|   |   |   |
|
|   |
|   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|   |   |
|
|   |
Template Sequence |   |
E | S | T | Q | A | A | F | E | A | G | A | T | L | V | H | L | H | V | R | N | D | D | E | T | P | T | S | N | P | D | R | F | A | L | V | L | E | G | I | R | K | H | A | P | G | X | I | T | Q | V | S | T | G | G | R | S | G | A | G | N | E | R | G | A | X | L | S | L | R | P | D | X | A | S | L | A | T | G | S | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |
|  |  |
| T | T | S |
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|  |  |  |  |
|
|
|
|
| T | T |
|
| G | G | G | G | T | T | G | G | G |
|
| S |  |  |  |  |  |
| S |
|  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|
|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|
Template SS confidence |   |
|
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  |   |
33 | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . |
  |
  |   |
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91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | |
|
|
. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  | . | . | . |  |
|
|  |  |  |  |  |  |  |
|
|
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|
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|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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| . |
. |
. |
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Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
I | N | G | Q | A | F | R | L | I | D | E | I | R | R | H | D | M | K | V | G | L | I | L | N | P | E | T | P | V | E | A | M | K | Y | Y | I | H | . |
. |
. |
K | A | D | K | I | T | V | M | T | V | D | P | G | F | A | G | Q | P | F | I | P | E | M | L | D | K | L | A | E | L | K |
Query Conservation |   |
. | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . |
|
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| . | . | . |
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|
|
Template Conservation |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
|   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
Template Sequence |   |
N | F | P | T | R | V | Y | D | N | P | P | E | L | V | D | W | L | A | A | E | X | K | T | Y | G | I | K | P | E | V | E | A | F | D | L | S | X | I | F | Q | A | A | A | X | Q | A | A | G | A | I | V | G | P | L | H | I | Q | F | V | X | G | I | K | N | A | X | P | V | D | R | E | V | L | E | F | Y | V | Q | T | L |
Template Known Secondary structure |   |
 |
| S | S | S |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  | S | S | T |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
| S | S |
|  |  |  |  |  |  |
|
| T | T | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
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  |   |
113 | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . |
  |
  |   |
159 | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | |
|
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|
|
. | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
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|
Query Sequence |   |
A | W | R | E | R | E | G | L | E | Y | E | I | E | V | D | G | S | C | N | Q | A | T | Y | E | K | L | M | A | A | G | A | D | V | F | I | V | G | T | S | G | L | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
N | H | A | E | N | I | D | E | A | W | R | I | M | T | A | Q | I | L | A | A | K | S | E | V |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |
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|   |
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|   |
|
| . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
Alig confidence |   |
|
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| . |
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| . |
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| . | . | . | . |
| . | . | . | . | . | . | . | . | . |
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|
Template Conservation |   |
  |   |   | . |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
| . |
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|
| . | . | . | . |
|
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|   |
|   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|   |   |   |   |   |
|
|   |   |   |
|
|   |   |
Template Sequence |   |
K | R | L | . |
S | P | D | A | T | W | T | G | A | G | I | G | R | H | Q | L | T | X | A | R | W | S | L | E | L | G | G | H | . |
C | R | T | G | . |
. |
. |
. |
L | E | D | N | V | R | L | D | K | N | T | L | A | P | S | N | A | A | L | V | R | Q | V | A | E | L | C | E | E | Y | G | R | P | V |
Template Known Secondary structure |   |
 |  |  | . |
| T | T |
|  |  |  |  |  |  |
| S | T | T |  |  |  |  |  |  |  |  |  |  |  | T |
|  | . |  |  |  | S | . | . | . | . | T | T | T |
| S | B | S | S | S | S |
| B |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
Template Predicted Secondary structure |   |
 |  |
| . |
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
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| . |  |  |  |
| . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
Template SS confidence |   |
|
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  |   |
193 | . | . | |
. | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | |
. | . | . | . | |
|
|
|
. | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . |
  |