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Job DescriptionP32719
Confidence76.53%DateThu Jan 5 11:50:42 GMT 2012
Rank435Aligned Residues158
% Identity17%Templatec3no3A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glycerophosphodiester phosphodiesterase; PDBTitle: crystal structure of a glycerophosphodiester phosphodiesterase2 (bdi_0402) from parabacteroides distasonis atcc 8503 at 1.89 a3 resolution
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   15....20.........30... ......40...... ...50.........60.
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Query Sequence  FKEQIEFIDSHADYFHIDI. . . MDGHFVPNLTLSP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FFVSQVKKLATKPLD
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Template Sequence  IRSLERASEIGAYGSEFDVHLTADNVLV. . VYHDNDIQGKHIQSCTYDELKDLQLSNGEKLPTLEQYLKRAKKLKNIRLI
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Query Sequence  CHLMVTRPQDYIAQLARAGADFITLHPETINGQAFRLIDEIRRHDMK. . VGLILNPETPVEAMKYYIHKADKITVMTVDP
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Template Sequence  FELKSHDTPERNRDAA. . . . . . . . . . . . . . . . . . RLSVQXVKRXKLAKRTDYISFNXDACKEFIRLCPKSEVSYLNGELS
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   122.......130....... ..140.........150.........160.........170.........180...
 
   140.........150.........160.........170.........180.........190....
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Query Sequence  . . . . . . . GFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIV
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Template Sequence  PXELKELGFTGLDYHYKVLQSHPDWVKDCKVLGXTSNVW. . TVDDPKLXEEXIDXGVDFITT
Template Known Secondary structure  TT

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   184.....190.........200.........210.........220.. .......230.........240...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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