|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | |
. | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
|
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|
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |
|
|
|  |  |  |  |  |  |
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| . | . | . | . | . |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
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| . |
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| . |
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Query Sequence |   |
I | S | P | S | L | M | C | M | D | L | L | K | F | K | E | Q | I | E | F | I | . |
D | S | H | A | D | Y | F | H | I | D | I | M | D | G | H | F | V | P | N | L | T | L | S | . |
. |
. |
. |
. |
P | F | F | V | S | Q | V | K | K | L | A | T | K | P | L | D | C | H | L | M | V | T | R | P | Q | D | Y | I | A | Q | L |
Query Conservation |   |
|   |
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|   |
|   |
|   |   |   |
|   |   |   |
|   |   |   | . |
|   |
|   |
|   |
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|   |
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|   |   |
| . | . | . | . | . |   |   |   |
|   |   |
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|   |   |   |   |   |   |
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|   |   |   |   |
|   |   |   |
|   |   |   |
Alig confidence |   |
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| . |
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| . | . | . | . | . | . |
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| . | . | . | . | . |
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| . | . | . | . | . | . | . |
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Template Conservation |   |
|
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|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |   |
|
|   |   |
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|
|   | . | . | . | . | . | . |
|   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |
|
|
| . | . | . | . | . | . | . |
|
|   |   |
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|
Template Sequence |   |
V | T | D | S | G | M | I | P | E | G | K | T | L | Y | G | Q | V | E | A | G | L | Q | N | G | V | T | L | V | Q | I | R | E | . |
. |
. |
. |
. |
. |
K | D | A | D | T | K | F | F | I | E | E | A | L | Q | I | K | E | L | C | H | A | H | N | V | P | L | I | I | . |
. |
. |
. |
. |
. |
. |
N | D | R | I | D | V | A |
Template Known Secondary structure |   |
 |
|
| S | T | T |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  | S | S |
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | S | S | S |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  | . | . | . | . | . | . | . |  | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
| . | . | . | . | . | . |
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  | . | . | . | . | . | . | . |  |
|
|  |  |  |  |
Template SS confidence |   |
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  |   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | |
|
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|
. | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | |
|
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. | . | . | . | . | 80 | . |
  |
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | |
. | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
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|  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  | . |
|
|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
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| . |
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Query Sequence |   |
A | R | A | G | A | D | F | I | T | L | H | P | E | T | I | N | G | Q | A | F | R | L | I | D | E | I | R | R | H | D | M | K | V | G | L | I | L | N | P | E | T | P | V | E | A | M | K | Y | Y | I | H | K | . |
A | D | K | I | T | V | M | T | V | D | P | G | F | A | G | Q | P | F | I | P | E | M | L | D | K | L | A |
Query Conservation |   |
  |   |
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   | . |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
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| . | . | . |
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| . |
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| . |
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|
Template Conservation |   |
  |   |   |   |
|
|
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|
|
| . | . | . |
|
|   |
|   |   |   |   |   |   |
|   |   |
|
|   |   |   |
|
|
|   |
|   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
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|
|   |   |
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|   |
|   |
|
|   |   | . |   |   |   |
|   |   |
|
|   |
Template Sequence |   |
M | A | I | G | A | D | G | I | H | V | . |
. |
. |
G | Q | D | D | M | P | I | P | M | I | R | K | L | V | G | P | D | M | V | I | G | W | S | V | G | F | P | E | E | V | D | E | L | S | K | M | G | P | D | M | V | D | Y | I | G | V | G | T | L | F | P | T | L | T | K | K | N | . |
K | K | M | G | T | A | G | A | I |
Template Known Secondary structure |   |
 |  |  | T |
| S |  |  |  |  | . | . | . |
| T | T | S | S |
|  |  |  |  |  |  |  |  |
| T | T | S |  |  |  |  |  |  |
| S | T |  |  |  |  |  |  |  | T | T |
| T | T | S |
|
|  |  |  |  |
|
|
| S |
|
| S | S |
|
|
| . |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|  |  |  |  | . | . | . |
|  |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
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|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
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|
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|
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  |   |
82 | . | . | . | . | . | . | . | 90 | . | |
|
|
. | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | |
. | 150 | . | . | . | . | . | . | . |
  |
  |   |
156 | . | . | . | 160 | . | . | . | . | . | . | |
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
|
|
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. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
| . |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . |  |
|
|
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|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
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|
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| . |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
E | L | K | A | W | R | E | R | E | G | L | . |
E | Y | E | I | E | V | D | G | S | C | N | Q | A | T | Y | E | K | L | M | . |
. |
. |
. |
. |
. |
. |
. |
A | A | G | A | D | V | F | I | V | G | T | S | G | L | F | N | H | A | E | N | I | D | E | A | W | R | I | M | T | A | Q | I | L | A |
Query Conservation |   |
  |
|   |   |   |   |   |   |   |   |   | . |   |   |   |
|   |
|
|
|
|
|   |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . |   |   |
|
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|   |
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|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
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| . |
|
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| . | . | . | . | . | . | . | . |
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| . | . |
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|
Template Conservation |   |
  |
|   |   |   |   |   |   |   |   |   |   |   |
|
|
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|
|   |   |   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
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|
|   | . | . |   |
|   |
|
|   |   |
|
|   |   |
|   |   |   |   |   |   |
Template Sequence |   |
R | V | L | D | A | L | E | R | N | N | A | H | W | C | R | T | V | G | I | G | G | L | H | P | D | N | I | E | R | V | L | Y | Q | C | V | S | S | N | G | K | R | S | L | D | G | I | C | V | V | S | D | I | I | . |
. |
A | S | L | D | A | A | K | S | T | K | I | L | R | G | L | I | D | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | T |
| T | T |
|  |  |  |  |  | S | S |
|
| T | T | T |  |  |  |  |  |  |  |
| B |
| T | T | S |
|
| B |
| S |  |  |  |  | S | T | T | T | T | . | . | T |
| T | T |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
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|
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | |
|
. | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
  |