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Job DescriptionP32719
Confidence85.33%DateThu Jan 5 11:50:42 GMT 2012
Rank399Aligned Residues189
% Identity13%Templatec3n2xB_
PDB info PDB header:lyaseChain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.. .......30.........40..... ....50.... .....60..... ....70........
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Query Sequence  CMDLLKFKEQIEFI. DSHADYFHIDIMDGHFVPNLTLS. . . . PFFVSQVKK. . LATKPLDCHLM. . . VTRPQDYIAQLAR
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Template Sequence  QLDKPGTAALIDDLIKAGVDGLFFL. . . GSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQ
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   30.........40.........50.... .....60.........70.........80.........90.........100......
 
   7980.........90 .........100.. .......110..... ....120.........130.........140........
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Query Sequence  AGADFITLHPET. . . . INGQAFRLIDEI. RRHDMKVGLILNP. . . . . ETPVEAMKYYIHKADKITVMTVDPGFAGQPFIP
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Template Sequence  AGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADS. . . . . . . . . . RSNIIGIDTI
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   107..110.........120.........130.........140.........150.........160...... ...170......
 
   149150.........160.........170.........180.........190.........200.........210........
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Query Sequence  EMLDKLAELKAWREREGLEYEIEVDGSCNQATYEKLMAAGADVFIVGTSGLFNHAENIDEAWRIMTAQIL
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Template Sequence  DSVAHLRSMIHTVKGAHPHFTVLCG. . . YDDHLFNTLLLGGDGAISASGNF. . . . . APQVSVNLLKAWRD
Template Known Secondary structure  S

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   178.180.........190.........200.. .......210.........220..... ....230.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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