Job Description P32719 Confidence 82.08% Date Thu Jan 5 11:50:42 GMT 2012 Rank 411 Aligned Residues 106 % Identity 19% Template c3mo4B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-1,3/4-fucosidase; PDBTitle: the crystal structure of an alpha-(1-3,4)-fucosidase from2 bifidobacterium longum subsp. infantis atcc 15697 Resolution 1.90 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.																									.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	Q	D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	E	A	M	K
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		D	V	D	Q	W	X	D	A	L	V	A	G	G	X	A	G	V	I	L	T	C	K	H	H	D	G	F	C	L	W	P	S	R	L	T	R	H	T	V	A	S	S	P	W	R	E	G	K	G	D	L	V	R	E	V	S	E	S	A	R	R	H	G	L	K	F	G	V	Y	L	S	P	W	D	R	T	.	.	.	.
Template Known Secondary structure													T	T		S									T	T			B	S	S			T	T		S	S	B	G	G	G	S	S	G	G	G	G	T														T	T									S			S	S	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.													.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V
Query Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	S	Y	G	K	G	K	A	Y	D	D	F	Y	V	.	.	G	Q	L	T	E	L	L	T	Q	Y	G	P	I	F	S	V	W	L	D	G	A	N	G	E	G	K	N	G	K	T	Q	Y	Y	D	W	D	R	Y	Y	N	V	I	R	S	L	Q	P	D	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T	T	T	S	S									.	.									S	S	S			S										B		T	T	S		B																	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.
Template SS confidence
																139	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		192	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		203	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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