Job Description P32719 Confidence 97.70% Date Thu Jan 5 11:50:42 GMT 2012 Rank 207 Aligned Residues 201 % Identity 13% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40				.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																												.	.	.																																							.							.
Query SS confidence																												.	.	.																																							.							.
Query Sequence		F	K	E	Q	I	E	F	I	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	.	.	.	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	I	A	Q	L	A	R	.	A	G	A	D	F	I	.	T	L	H	P	E
Query Conservation																												.	.	.																																							.							.
Alig confidence																				.								.	.	.																						.	.																.							.
Template Conservation																				.																																.	.
Template Sequence		L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	.	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P	E	I	A	R	V	P	V	X	.	.	I	D	S	S	K	W	E	V	I	E	A	G	L	K	C	L	Q	G	K	S	I	V	N	S	I	S	L	K
Template Known Secondary structure											T	T		S						.				T	T	S															T						T	S				.	.				S													S	S									S	T
Template Predicted Secondary structure																				.																																.	.
Template SS confidence
		381	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.		.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.			430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.						.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.									.	.	.	.	.						140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																											.	.	.	.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.
Query SS confidence																											.	.	.	.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.
Query Sequence		T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	.	.	.	.	.	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	.	.	.	.	.	.	.	.	M	T	V	D	P	.	.	.	.	.	G	F	A	G	Q	P	F	I	P	E	M	L
Query Conservation																											.	.	.	.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.
Alig confidence																											.	.	.	.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.
Template Conservation
Template Sequence		E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R	A	Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A	V	A	T	G	I	E	E	H	N	N	Y	A	V
Template Known Secondary structure		T																T							S			T	T					S																			T				G	G	G											S	S	S		G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		458	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.					.	.	.	.	.										.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.																		.	.	200
Predicted Secondary structure															.									.	.	.	.						.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.									.	.	.	.						.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	L	A	E	L	K	A	W	R	E	R	E	.	G	L	E	Y	E	I	E	V	.	.	.	.	D	G	S	C	N	.	.	.	.	.	.	.	.	.	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	F
Query Conservation															.									.	.	.	.						.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.									.	.	.	.						.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G	G	V	S	N	L	S	F	S	F	R	G	N	N	Y	I	R	E	A	X	H	A	V	F	L	Y	H	A	I	Q	Q	G	X	D	X	G	I	V	N	P	G	S	V	L	Y	S	D	I	P	A	D	T	L	E	K	I	E	D	V	V	L
Template Known Secondary structure														S	T	T						B	G	G	G	G	G	G	G	G	T	T																			T	T													G	G	G	S													T
Template Predicted Secondary structure
Template SS confidence
		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	R	R	P	D	A	A	E	R	L	I	E	L	A	E	A	L	K
Template Known Secondary structure		T		S	T	T
Template Predicted Secondary structure
Template SS confidence
		619	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions