Job Description P32719 Confidence 95.14% Date Thu Jan 5 11:50:42 GMT 2012 Rank 303 Aligned Residues 164 % Identity 13% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.										.	.																								.															.	.	.	.	.	.	.	.	.
Query SS confidence																							.										.	.																								.															.	.	.	.	.	.	.	.	.
Query Sequence		K	I	S	P	S	L	M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	Y	F	H	I	.	.	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	.	L	A	T	K	P	L	D	C	H	L	M	V	T	R	.	.	.	.	.	.	.	.	.
Query Conservation																							.										.	.																								.															.	.	.	.	.	.	.	.	.
Alig confidence																							.										.	.							.	.																.															.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.
Template Sequence		K	I	C	V	P	I	I	G	K	N	K	K	D	I	I	K	E	A	K	E	L	K	D	A	C	L	D	I	I	E	W	R	V	D	F	F	E	N	V	.	.	E	N	I	K	E	V	K	E	V	L	Y	E	L	R	S	Y	I	H	D	I	P	L	L	F	T	F	R	S	V	V	E	G	G	E	K	L	I	S	R
Template Known Secondary structure										S	S											T	T	T	S	S		S						G	G	G		T	T	T	.	.	T																	T	T	S									G	G	G	T		S
Template Predicted Secondary structure																																									.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.			.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
				69	70	.	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.						.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.													.																																			.	.								.	.	.	.	.
Query SS confidence		.	.													.																																			.	.								.	.	.	.	.
Query Sequence		.	.	P	Q	D	Y	I	A	Q	L	A	R	A	G	.	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	.	.	P	E	T	P	V	E	A	.	.	.	.	.	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D
Query Conservation		.	.													.																																			.	.								.	.	.	.	.
Alig confidence		.	.													.																																			.	.								.	.	.	.	.
Template Conservation
Template Sequence		D	Y	Y	T	T	L	N	K	E	I	S	N	T	G	L	V	D	L	I	D	V	E	L	F	M	G	D	E	V	I	D	E	V	V	N	F	A	H	K	K	E	V	K	V	I	I	S	N	H	D	F	N	K	T	P	K	K	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A	D	L	P	K	I	A	V	M
Template Known Secondary structure														T	S			S						G	G	G															T	T										S	S																		T	T		S
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		P	Q	N	E	.	.	.	.	.	K	D	V	L	V	L	L	E	A	T	N	E	M	F	K	I	Y	A	D	R	P	I	I	T	M
Template Known Secondary structure			S	S		.	.	.	.	.																T	T		S	S		B
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		176	.	.	.						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions