Job Description P32719 Confidence 96.86% Date Thu Jan 5 11:50:42 GMT 2012 Rank 250 Aligned Residues 170 % Identity 16% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																	.																								.
Query SS confidence																	.																								.
Query Sequence		M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	.	P	F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T
Query Conservation																	.																								.
Alig confidence																	.												.	.	.	.	.	.							.																											.
Template Conservation																													.	.	.	.	.	.																																		.
Template Sequence		A	F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	F	G	V	D	Y	I	E	L	T	S	.	.	.	.	.	.	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	R	C	H	M	D	D	.	A	R	V	A	V	E	T	G	V	D	G	V	D
Template Known Secondary structure																				T		S							.	.	.	.	.	.	G	G	G													T	S			S	S								S					.							T	T		S
Template Predicted Secondary structure																													.	.	.	.	.	.																																		.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.							.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.
		86	.	.	.	90	.	.														.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																		.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																		.	.	.	.
Query Sequence		L	H	P	E	T	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	.	.	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	.	.	.	.	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																		.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.																		.	.	.	.														.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A	D	T	V	G	C	A	T	.	.	.
Template Known Secondary structure						G	G	G																										T	T								T	T	G	G	G	S																		S							S	S	S				.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																												.	.	.	.
Query SS confidence																												.	.	.	.
Query Sequence		I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	.	.	.	.	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F
Query Conservation																												.	.	.	.
Alig confidence		.	.	.	.															.								.	.	.	.
Template Conservation		.	.	.	.															.
Template Sequence		.	.	.	.	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	.	V	S	C	D	I	E	C	H	F	H	N	D	T	G	M	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	H	I
Template Known Secondary structure		.	.	.	.															.		S	S							B		T	T	S													T
Template Predicted Secondary structure		.	.	.	.															.
Template SS confidence
						203	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions