|   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | F | F | V | S | Q | V | K | K | L | A | T | K | P | L | D | C | H | L | M | V | T | R | P | Q | D | Y | I | A | Q | L | A | R | A | G | A | D | F | I | T | L | H | P | E | T | I | N | G | Q | A | F | R | L | I | D | E | I | R | R | H | D | M | K | V | G | L | I | L | N | P | E | T | P | V | E | A | M | K | Y | Y |
Query Conservation |   |
  |   |   |
|   |   |
|
|   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |
|   |
|   |
|   |
|   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |
|
|   |   |   |
|
|
|
|
|   |
|
|   |
|
|
|
|   |   |
| . |
|   |
|
|
|
|
|
|
|
|   |
| . | . | . |
|
|
|
|
|
|   |   |
|
|   |   |   |   |
|   |
|   |   |
|   |
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
P | K | M | I | K | D | I | M | N | S | V | S | I | P | V | M | A | K | V | R | I | G | H | F | V | E | . |
A | Q | I | I | E | A | L | E | V | D | Y | I | . |
. |
. |
D | E | S | E | V | L | T | P | A | D | W | T | H | H | I | E | K | D | K | F | K | V | P | F | V | C | G | A | K | D | L | G | E | A | L | R | R | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T | S |
| S | S |
|  |  |  |  |  |
| T | T |
|  |  |  | . |  |  |  |  |  |  |  | T |
| S |  |  | . | . | . |  |  |
| T | T | S |
|
| S |
| S | S |
|
|
|
| G | G | G |
| S | S |
|  |  |  |  |  | S | S |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | |
. | 90 | . | . | . | . | . | . | . | . | . | 100 | |
|
|
. | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . |
  |
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 170 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | H | K | A | D | K | I | T | V | M | T | V | D | P | G | F | A | G | Q | P | F | I | P | E | M | L | D | K | L | A | E | L | K | A | W | R | E | R | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | L | E | Y | E | I | E | V | D | G | S | C | N |
Query Conservation |   |
  |   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|   |
|
|
|   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
Template Sequence |   |
N | E | G | A | A | M | I | R | T | K | G | E | . |
A | G | T | G | D | V | S | E | A | V | K | H | I | R | R | I | T | E | E | I | K | A | C | Q | Q | L | K | S | E | D | D | I | A | K | V | A | E | E | M | R | V | P | V | S | L | L | K | D | V | L | E | K | G | K | L | P | V | V | N | F | A | A | G | G | V | A | T |
Template Known Secondary structure |   |
 | T | T |
| S |  |  |  |  |
|
|
| . | T | T | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  | T | S |
| S | S |  |  |  | B |
| S | S |
|
| S |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
139 | 140 | . | . | . | . | . | . | . | . | . | 150 | |
. | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
  |
  |   |
178 | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | T | Y | E | K | L | M | A | A | G | A | D | V | F | I | V | G | T | S | G | L | F | N | H | A | E | N | I | D | E | A | W | R | I | M | T | A | Q | I |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|   |
|
|   |   |   |
|   |
|
|
|   |
|
|
Template Sequence |   |
P | A | D | A | A | L | L | M | Q | L | G | C | D | G | V | F | V | G | S | G | I | F | . |
. |
K | S | S | N | P | V | R | L | A | T | A | V | V | E | A | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |
|
| S | S | S | T | . | . | T | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|  |  |  | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | |
|
240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . |
  |