Job Description P32719 Confidence 90.60% Date Thu Jan 5 11:50:42 GMT 2012 Rank 362 Aligned Residues 180 % Identity 14% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		9	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																.																								.	.	.	.	.	.	.	.	.	.													.	.																.	.	.
Query SS confidence																.																								.	.	.	.	.	.	.	.	.	.													.	.																.	.	.
Query Sequence		C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	.	.	.	.	.	.	.	.	.	.	P	F	F	V	S	Q	V	K	K	L	A	T	.	.	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	.	.	.
Query Conservation																.																								.	.	.	.	.	.	.	.	.	.													.	.																.	.	.
Alig confidence																.						.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.													.	.																.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.
Template Sequence		R	V	R	A	D	V	M	G	R	L	C	D	D	L	I	Q	A	G	V	H	.	.	.	.	.	.	.	.	.	G	L	T	P	L	G	S	T	G	E	F	A	Y	L	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	Q	R	R	V	P	V	V	A	G	V	A	S	T	S	V	A	D	A	V	A	Q
Template Known Secondary structure			B															T	T		S	.	.	.	.	.	.	.	.	.		B	B	T	T	S	G	G	G	T	G	G	G																		T	T	S	S		B							S	S
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																				.	.	.	.													.															.	.	.	.	.
Query SS confidence																				.	.	.	.													.															.	.	.	.	.
Query Sequence		I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	.	.	.	.	I	N	G	Q	A	F	R	L	I	D	E	I	.	R	R	H	D	M	K	V	G	L	I	L	N	P	E	.	.	.	.	.	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A
Query Conservation																				.	.	.	.													.															.	.	.	.	.
Alig confidence																				.	.	.	.													.															.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		A	K	L	Y	E	K	L	G	A	D	G	I	L	A	I	L	E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	I	Y	T	N	P	Q	F	Q	R	S	D	L	T	L	D	V	I	A	R	L	A	E	H	.	.	.	.	.	.	.	.	.	.	P	R	I	R
Template Known Secondary structure									T		S									S	S																			S	S								T	T	T		S	S												T	S	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.											.	.	160	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L
Query Conservation
Alig confidence																						.	.	.	.	.												.																						.	.	.	.	.
Template Conservation																						.	.	.	.	.												.																						.	.	.	.	.
Template Sequence		Y	I	K	D	A	S	T	N	T	G	R	L	L	S	I	I	N	R	C	G	.	.	.	.	.	D	A	L	Q	V	F	S	A	S	A	H	.	I	P	A	A	V	M	L	I	G	G	V	G	W	M	A	G	P	A	C	I	A	.	.	.	.	.	P	R	Q	S	V	A	L	Y	E	L	C	K	A
Template Known Secondary structure							S	S													G	.	.	.	.	.	G	G	S						T	T	S	.								T	T							G	G	G	G	T		.	.	.	.	.													T
Template Predicted Secondary structure																						.	.	.	.	.												.																						.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.						.	.	.	.	.	.	.	.	190	.	.		.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.						.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions