Job Description P32719 Confidence 95.18% Date Thu Jan 5 11:50:42 GMT 2012 Rank 302 Aligned Residues 206 % Identity 16% Template c3e49A_ PDB info PDB header:metal binding protein Chain: A: PDB Molecule:uncharacterized protein duf849 with a tim barrel fold; PDBTitle: crystal structure of a prokaryotic domain of unknown function (duf849)2 with a tim barrel fold (bxe_c0966) from burkholderia xenovorans lb4003 at 1.75 a resolution Resolution 1.75 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.				.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.																																			.	.	.																							.	.
Query SS confidence																		.	.	.																																			.	.	.																							.	.
Query Sequence		K	E	Q	I	E	F	I	D	S	H	A	D	Y	F	H	I	.	.	.	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	H	L	M	.	.	.	V	T	R	P	Q	D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	.	.
Query Conservation																		.	.	.																																			.	.	.																							.	.
Alig confidence																		.	.	.																																			.	.	.																							.	.
Template Conservation
Template Sequence		Q	A	S	I	G	A	A	E	A	G	A	A	V	I	H	L	H	A	R	D	P	R	D	G	R	P	T	Q	D	P	A	A	F	A	E	F	L	P	R	I	K	S	N	T	D	A	V	I	N	L	T	T	G	G	S	P	H	X	T	V	E	E	R	L	R	P	A	T	H	Y	X	P	E	L	A	S	L	N	X	G
Template Known Secondary structure											T		S									T	T	T											T	T																	S		S		T	T	S															S							S
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
																																		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.				.	.	130	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	.	.	.	K	A	D	K	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.
Template Conservation
Template Sequence		S	X	N	F	G	L	Y	P	X	L	E	R	F	K	E	F	A	H	G	W	E	R	E	H	L	E	R	S	R	D	L	V	F	K	N	T	F	A	D	I	E	F	I	L	K	T	C	G	G	N	G	T	R	F	E	F	E	C	Y	D	T	S	H	L	Y	N	L	A	H	F	V	D	R	K	L	A	T	P	P	F
Template Known Secondary structure								G	G	G	G	G	T					S	S									G	G	G	G																			T	T	T									S													T	T		S		S	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.								.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.
Query Sequence		T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	.	.	.	.	.	.	.	T	S	G	L	F	N	H	A	E	N
Query Conservation																																																																	.	.	.	.	.	.	.
Alig confidence																																																												.					.	.	.	.	.	.	.					.	.
Template Conservation																																																												.																.	.
Template Sequence		F	V	Q	T	V	F	G	L	L	G	G	I	G	P	H	P	E	D	L	A	H	X	R	R	T	A	D	R	L	F	G	A	D	Y	V	W	S	I	L	G	A	G	R	H	Q	I	P	L	A	S	I	G	A	A	Q	G	A	N	.	V	R	V	G	L	E	D	S	L	W	I	A	P	G	E	.	.	L	A	E	T
Template Known Secondary structure								S		T	T	S																				G	G	G									G	G	G										T	T	T			.					T	T	T		S				T	T		.	.			S
Template Predicted Secondary structure																																																												.																.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.			.	.	270	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	E	A	W	R	I	M	T	A	Q	I	L	A	A	K	S	E	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	A	Q	V	R	K	I	R	Q	V	I	E	G	L	S	L	E	V
Template Known Secondary structure																T	T			B
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions