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Job DescriptionP32719
Confidence81.38%DateThu Jan 5 11:50:42 GMT 2012
Rank415Aligned Residues170
% Identity11%Templatec3dfyJ_
PDB info PDB header:isomeraseChain: J: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of apo dipeptide epimerase from2 thermotoga maritima
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKISPSLMCMDLLKFKEQIEFI. DSHADYFHIDIMDGHFVPNLTLSPFFVSQVKK. LATKPLDCH. . . . LMVTRPQDYIA
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Template Sequence  IETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKV. . G. . . ENLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFAR
Template Known Secondary structure  B

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Query Sequence  QLARAGADFITLHPETINGQAFRLIDEIRRHDMKVGLILNPETPVEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKL
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Template Sequence  AVYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEE. . AVDYVNIKLMKSG. . . . . . . ISDA
Template Known Secondary structure  TT


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   204.....210.........220.........230.........240.........250....... ..260.........270 ....
 
   155....160.........170.........180....
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Query Sequence  AELKAWREREGLEYEIEVDGSCNQATYEKL
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Template Sequence  LAIVEIAESSGLKLMIGCMGESSLGINQSV
Template Known Secondary structure  TTT


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Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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