Job Description P32719 Confidence 93.05% Date Thu Jan 5 11:50:42 GMT 2012 Rank 338 Aligned Residues 181 % Identity 14% Template c3cwoX_ PDB info PDB header:de novo protein Chain: X: PDB Molecule:beta/alpha-barrel protein based on 1thf and 1tmy; PDBTitle: a beta/alpha-barrel built by the combination of fragments2 from different folds Resolution 3.10 Å

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		17	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.					.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure										.										.	.	.	.
Query SS confidence										.										.	.	.	.
Query Sequence		E	Q	I	E	F	I	D	S	.	H	A	D	Y	F	H	I	D	I	.	.	.	.	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I
Query Conservation										.										.	.	.	.
Alig confidence										.										.	.	.	.				.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.
Template Sequence		E	A	V	E	K	Y	K	E	L	K	P	D	I	V	T	M	D	I	T	M	P	E	M	N	G	.	.	.	.	.	.	.	.	.	I	D	A	I	K	E	I	M	K	I	D	P	N	A	K	I	I	V	C	S	A	M	G	Q	Q	A	M	V	I	E	A	I	K	A	G	A	K	D	F	I	V	N	T	A	A	V
Template Known Secondary structure		T	T										S								S	T	T	S	S		.	.	.	.	.	.	.	.	.											S	S	S									S	S	T										T	T							S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40										.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.																				.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.											.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.											.
Query Sequence		N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	A	M	K	Y	Y	I	H	K	.	A	D	K	I	T	V	M	T	V	D	.	P	G	F	A	G	Q	P	F	I	P	E	M
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.											.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.											.									.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		E	N	P	S	L	I	T	Q	I	A	Q	T	F	G	S	Q	A	V	V	V	A	I	D	A	K	R	V	D	G	E	F	M	V	F	T	Y	S	G	K	K	N	T	G	I	L	L	R	D	W	V	V	E	V	E	K	R	G	A	G	E	I	L	L	T	S	I	D	R	D	G	T	K	S	G	Y	D	.	.	.	.
Template Known Secondary structure				T											T	G	G	G										S	S	S							T	T	T	T																		T		S							T	T	T	T	T			S				.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A
Query Conservation
Alig confidence		.	.	.	.																																												.
Template Conservation		.	.	.	.																																												.
Template Sequence		.	.	.	.	T	E	M	I	R	F	V	R	P	L	T	T	L	P	I	I	A	S	G	G	A	G	K	M	E	H	F	L	E	A	F	L	A	G	A	D	A	A	L	A	A	S	V	.	F	H	F	R	E	I	D	V	R	E	L	K	E	Y	L	K	K
Template Known Secondary structure		.	.	.	.								G	G	G			S						S				S											T		S					S			.			T	T	S	S											T
Template Predicted Secondary structure		.	.	.	.																																												.
Template SS confidence
						163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions