Job Description P32719 Confidence 80.91% Date Thu Jan 5 11:50:42 GMT 2012 Rank 418 Aligned Residues 190 % Identity 16% Template c3bi8A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of dihydrodipicolinate synthase from clostridium2 botulinum Resolution 1.96 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.																								.	.	.	.										.	.																.	.	.
Query SS confidence															.																								.	.	.	.										.	.																.	.	.
Query Sequence		M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	.	.	.	.	P	F	F	V	S	Q	V	K	K	.	.	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	.	.	.	Q	D	Y	I	A	Q	L	A	R	A
Query Conservation															.																								.	.	.	.										.	.																.	.	.
Alig confidence															.											.	.	.											.	.	.	.										.	.																.	.	.
Template Conservation																										.	.	.
Template Sequence		V	D	F	D	K	L	S	E	L	I	E	W	H	I	K	S	K	T	D	A	I	I	V	C	.	.	.	G	T	T	G	E	A	T	T	M	T	E	T	E	R	K	E	T	I	K	F	V	I	D	K	V	N	K	R	I	P	V	I	A	G	T	G	S	N	N	T	A	A	S	I	A	M	S	K	W	A	E	S	I
Template Known Secondary structure		B															T	T							S	.	.	.	S	G	G	G	T	G	G	G	S																	T	T	S	S									S	S														T
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.				.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.													.															.	.	.	.	.
Query SS confidence													.	.	.	.													.															.	.	.	.	.
Query Sequence		G	A	D	F	I	T	L	H	P	E	T	.	.	.	.	I	N	G	Q	A	F	R	L	I	D	E	I	.	R	R	H	D	M	K	V	G	L	I	L	N	P	E	.	.	.	.	.	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E
Query Conservation													.	.	.	.													.															.	.	.	.	.
Alig confidence													.	.	.	.													.															.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	D	G	L	L	V	I	T	P	Y	Y	N	K	T	T	Q	K	G	L	V	K	H	F	K	A	V	S	D	A	V	S	T	P	I	I	I	Y	N	V	P	G	R	T	G	L	N	I	T	P	G	T	L	K	E	L	C	E	D	.	.	.	.	.	.	.	.	.	.	K	N	I	V	A	V	K	E	A	S	G
Template Known Secondary structure		T		S									S	S																	T			S												S												T	T	S	.	.	.	.	.	.	.	.	.	.	S	S								S
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.											.	.	.	.	160	.	.	.	.	.	.
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200											.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	.	.	.	.	.	.	.	.	.	.	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.									.																									.	.	.	.	.	.	.	.	.	.
Template Conservation															.	.	.	.	.									.
Template Sequence		N	I	S	Q	I	A	Q	I	K	A	L	C	G	.	.	.	.	.	D	K	L	D	I	Y	S	G	.	N	D	D	Q	I	I	P	I	L	A	L	G	G	I	G	V	I	S	V	L	A	N	V	I	P	E	D	V	H	N	M	C	E	L	Y	L	N	G	K	V	N	E	A	L	K	I	Q	L	D	S	L	A
Template Known Secondary structure														G	.	.	.	.	.	G	G						S	.		G	G	G							T	T							S	G	G	G	T														T	T												T
Template Predicted Secondary structure															.	.	.	.	.									.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.						180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions