Job Description P32719 Confidence 75.69% Date Thu Jan 5 11:50:42 GMT 2012 Rank 440 Aligned Residues 174 % Identity 16% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.	.	.	.			.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.
Predicted Secondary structure																.																								.	.	.	.													.	.															.	.	.
Query SS confidence																.																								.	.	.	.													.	.															.	.	.
Query Sequence		C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	.	.	.	.	P	F	F	V	S	Q	V	K	K	L	A	T	.	.	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	.	.	.	Y	I	A	Q	L	A	R
Query Conservation																.																								.	.	.	.													.	.															.	.	.
Alig confidence																.											.	.	.											.	.	.	.													.	.															.	.	.
Template Conservation																											.	.	.
Template Sequence		T	V	D	I	D	A	M	I	A	H	A	R	R	C	L	S	N	G	C	D	S	V	T	L	F	.	.	.	G	T	T	G	E	G	C	S	V	G	S	R	E	R	Q	A	I	L	S	S	F	I	A	A	G	I	A	P	S	R	I	V	T	G	V	L	V	D	S	I	E	D	A	A	D	Q	S	A	E	A	L	N
Template Known Secondary structure		S	B															T	T		S					S	.	.	.	S	T	T	T	T	G	G	G	S		T	T												T	T			G	G	G								S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		79	80	.	.	.	.	.	.	.	.	.						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.					.	.	.	.	110	.	.	.	.	.						.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure													.	.	.	.	.																	.	.	.	.											.	.	.	.	.
Query SS confidence													.	.	.	.	.																	.	.	.	.											.	.	.	.	.
Query Sequence		A	G	A	D	F	I	T	L	H	P	E	.	.	.	.	.	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	.	.	.	.	D	M	K	V	G	L	I	L	N	P	.	.	.	.	.	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q
Query Conservation													.	.	.	.	.																	.	.	.	.											.	.	.	.	.
Alig confidence													.	.	.	.	.																	.	.	.	.											.	.	.	.	.														.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.
Template Sequence		A	G	A	R	N	I	L	L	A	P	P	S	Y	F	K	N	V	S	D	D	G	L	F	A	W	F	S	A	V	F	S	K	I	G	K	D	A	R	D	I	L	V	Y	N	I	P	S	V	T	M	V	T	L	S	V	E	L	V	G	R	L	K	A	A	.	.	.	.	.	.	.	.	F	P	G	I	V	T	G	V
Template Known Secondary structure		T	T		S									S	S		S																			T	T														S															.	.	.	.	.	.	.	.		T	T	T
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160									.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F
Query Conservation
Alig confidence																		.	.	.	.	.	.										.
Template Conservation																		.	.	.	.	.	.										.
Template Sequence		K	D	S	S	G	N	W	S	H	T	E	R	L	L	K	E	.	.	.	.	.	.	H	G	D	L	A	I	L	I	G	.	D	E	R	D	L	A	R	G	V	R	L	G	G	Q	G	A	I	S	G	V	A	N	F	L
Template Known Secondary structure					S													.	.	.	.	.	.		T	T	S						.											T	T							S	G	G	G	T
Template Predicted Secondary structure																		.	.	.	.	.	.										.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.							.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions