Job Description P32719 Confidence 85.94% Date Thu Jan 5 11:50:42 GMT 2012 Rank 394 Aligned Residues 157 % Identity 13% Template c2yswB_ PDB info PDB header:lyase Chain: B: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of the 3-dehydroquinate dehydratase from aquifex2 aeolicus vf5 Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.									.	.	70
Predicted Secondary structure																																	.	.																																					.	.	.	.	.	.	.	.
Query SS confidence																																	.	.																																					.	.	.	.	.	.	.	.
Query Sequence		M	K	I	S	P	S	L	M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	D	S	H	A	D	Y	F	H	I	.	.	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	H	L	M	V	T	.	.	.	.	.	.	.	.	R	P	Q
Query Conservation																																	.	.																																					.	.	.	.	.	.	.	.
Alig confidence																			.	.													.	.						.	.	.																	.												.	.	.	.	.	.	.	.
Template Conservation																			.	.																				.	.	.																	.
Template Sequence		M	L	I	A	V	P	L	D	D	T	N	F	S	E	N	L	K	.	.	K	A	K	E	K	G	A	D	I	V	E	L	R	V	D	Q	F	S	D	.	.	.	T	S	L	N	Y	V	K	E	K	L	E	E	V	H	S	Q	.	G	L	K	T	I	L	T	I	R	S	P	E	E	G	G	R	E	V	K	N	R	E
Template Known Secondary structure										S	T	T							.	.					T	T		S						G	G	G		S		.	.	.																T	.	T										G	G	G	T					T	T
Template Predicted Secondary structure																			.	.																				.	.	.																	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.			.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.				.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																											.	.	.																			.	.	.
Query SS confidence																																											.	.	.																			.	.	.
Query Sequence		D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	.	.	.	I	L	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	.	.	.	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q
Query Conservation																																											.	.	.																			.	.	.
Alig confidence								.														.																					.	.	.																			.	.	.										.	.	.	.	.	.
Template Conservation								.														.																																																						.	.	.	.	.	.
Template Sequence		E	L	F	E	E	L	.	S	P	L	S	D	Y	T	D	I	E	L	S	S	.	R	G	L	L	V	K	L	Y	N	I	T	K	E	A	G	K	K	L	I	I	S	Y	H	N	F	E	L	T	P	P	N	W	I	I	R	E	V	L	R	E	G	Y	R	Y	G	G	I	P	K	I	A	V	K	.	.	.	.	.	.
Template Known Secondary structure								.	G	G	G	S	S						T	T		.														T	T										S	S																		T	T	S								.	.	.	.	.	.
Template Predicted Secondary structure								.														.																																																						.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	A	N	S	Y	E	D	V	A	R	L	L	C	I	S	R	Q	V	E	G	E	K	I	L	I	S	M	G
Template Known Secondary structure		.	.	.		S	S												T	T	S		S		B						T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions