Job Description P32719 Confidence 89.64% Date Thu Jan 5 11:50:42 GMT 2012 Rank 369 Aligned Residues 194 % Identity 15% Template c2rfgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from hahella2 chejuensis at 1.5a resolution Resolution 1.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.					.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.
Predicted Secondary structure																.																								.	.	.	.										.	.																.	.	.
Query SS confidence																.																								.	.	.	.										.	.																.	.	.
Query Sequence		C	M	D	L	L	K	F	K	E	Q	I	E	F	I	.	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	.	.	.	.	P	F	F	V	S	Q	V	K	K	.	.	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	.	.	.	Q	D	Y	I	A	Q	L	A	R
Query Conservation																.																								.	.	.	.										.	.																.	.	.
Alig confidence																.											.	.	.											.	.	.	.										.	.																.	.	.
Template Conservation																											.	.	.
Template Sequence		Q	V	D	E	K	A	L	A	G	L	V	D	W	Q	I	K	H	G	A	H	G	L	V	P	V	.	.	.	G	T	T	G	E	S	P	T	L	T	E	E	E	H	K	R	V	V	A	L	V	A	E	Q	A	Q	G	R	V	P	V	I	A	G	A	G	S	N	N	P	V	E	A	V	R	Y	A	Q	H	A	Q	Q
Template Known Secondary structure																		T	T		S				T	T	.	.	.	S	G	G	G	T	G	G	G	S																	T	T	S	S		B							S	S
Template Predicted Secondary structure																											.	.	.
Template SS confidence
		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.				.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.		.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.													.															.	.	.	.	.
Query SS confidence														.	.	.	.													.															.	.	.	.	.
Query Sequence		A	G	A	D	F	I	T	L	H	P	E	T	.	.	.	.	I	N	G	Q	A	F	R	L	I	D	E	I	.	R	R	H	D	M	K	V	G	L	I	L	N	P	E	.	.	.	.	.	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P
Query Conservation														.	.	.	.													.															.	.	.	.	.
Alig confidence														.	.	.	.													.															.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																																																														.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	A	D	A	V	L	C	V	A	G	Y	Y	N	R	P	S	Q	E	G	L	Y	Q	H	F	K	M	V	H	D	A	I	D	I	P	I	I	V	Y	N	I	P	P	R	A	V	V	D	I	K	P	E	T	M	A	R	L	A	A	L	.	.	.	.	.	.	.	.	.	.	P	R	I	V	G	V	K	D	A	T
Template Known Secondary structure		T	T		S								T	T	T																			S	S												S													T	S	.	.	.	.	.	.	.	.	.	.	T	T								S
Template Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.											.	.	.	.	.	.	160	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200											.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.
Query Sequence		E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	.	.	.	.	.	.	.	.	.	.	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.												.																									.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.	.	.												.
Template Sequence		T	D	L	A	R	I	S	R	E	R	M	.	.	.	.	.	L	I	N	K	P	F	S	F	L	S	G	.	D	D	M	T	A	I	A	Y	N	A	S	G	G	Q	G	C	I	S	V	S	A	N	I	A	P	A	L	Y	G	Q	M	Q	T	A	T	L	Q	G	D	F	R	E	A	L	R	I	H	D	L	L	A	P
Template Known Secondary structure				T	T							T	.	.	.	.	.	T			S							S	.		G	G	G							T	T							S	G	G	G	T														T	T
Template Predicted Secondary structure													.	.	.	.	.												.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.						.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		219	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		238	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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