Job Description P32719 Confidence 99.63% Date Thu Jan 5 11:50:42 GMT 2012 Rank 48 Aligned Residues 187 % Identity 16% Template c2qcnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uridine 5'-monophosphate synthase; PDBTitle: covalent complex of the orotidine-5'-monophosphate decarboxylase2 domain of human ump synthase with 6-iodo-ump Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.				.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.				.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.																																	.	.	.																							.	.
Query SS confidence																				.	.	.																																	.	.	.																							.	.
Query Sequence		L	M	C	M	D	L	L	K	F	K	E	Q	I	E	F	I	D	S	.	.	.	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	L	A	.	.	.	T	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	I	A	Q	L	A	R	.	.
Query Conservation																				.	.	.																																	.	.	.																							.	.
Alig confidence																				.	.	.								.	.	.	.	.																					.	.	.																							.	.
Template Conservation																														.	.	.	.	.
Template Sequence		C	L	S	A	D	V	S	L	A	R	E	L	L	Q	L	A	D	A	L	G	P	S	I	C	M	L	K	T	.	.	.	.	.	H	V	D	I	L	N	D	F	T	L	D	V	M	K	E	L	I	T	L	A	K	C	H	E	F	L	I	F	E	D	R	K	F	A	D	I	G	N	T	V	K	K	Q	Y	E	G	G
Template Known Secondary structure								S													G	G	G		S					.	.	.	.	.		G	G	G		T	T																	T											S												T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.						.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
							79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.									120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																																										.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	.	.	.	.	.	.	.	.	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P
Query Conservation		.	.	.	.	.																																										.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																																										.	.	.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		I	F	K	I	A	S	W	A	D	L	V	N	A	H	V	V	P	G	S	G	V	V	K	G	L	Q	E	V	G	L	P	L	H	R	G	C	L	L	I	A	E	M	S	S	T	G	S	L	A	T	G	D	Y	T	R	A	A	V	R	M	A	E	E	H	S	E	F	V	V	G	F	I	S	G	S	.	.	.	.	.
Template Known Secondary structure		T	T		G	G	G	T		S						S	T	T		T											T	T	T	T										S	S	T	T					T												T	T	T	T	T							S	S	.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.											.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.												.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.												.
Query Sequence		F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	.	.	.	.	.	.	.	.	.	.	S	C	N	Q	A	T	Y	E	K	L	M	.	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T
Query Conservation																															.	.	.	.	.	.	.	.	.	.												.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.												.															.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	S	M	K	P	E	F	L	H	L	T	P	G	V	Q	L	E	A	G	G	D	N	L	G	Q	Q	Y	N	S	P	Q	E	V	I	G	K	R	G	S	D	I	I	I	V	G	R	G	I	I	.	.	S	A	A	D	R	L	E	A	A	E	M	Y	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S						S	B		S	S	S		B		T	T	S		B		B							T	T	S			S					S					.	.	T	S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																			.	.
Template SS confidence
																	405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.			.	.	.	.	.	460	.	.	.	.	.	.	.
		215	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	I	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	A	A	W	E	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		468	.	470	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions