Job Description P32719 Confidence 73.73% Date Thu Jan 5 11:50:42 GMT 2012 Rank 450 Aligned Residues 184 % Identity 20% Template c2pcqA_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthase; PDBTitle: crystal structure of putative dihydrodipicolinate synthase (ttha0737)2 from thermus thermophilus hb8 Resolution 2.10 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																																.	.																.	.	.
Query SS confidence																																																.	.																.	.	.
Query Sequence		C	M	D	L	L	K	F	K	E	Q	I	E	F	I	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	.	.	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	.	.	.	Q	D	Y	I	A	Q	L	A	R	A	G	A	D	F
Query Conservation																																																.	.																.	.	.
Alig confidence																										.	.	.																				.	.																.	.	.
Template Conservation																										.	.	.
Template Sequence		R	L	D	E	E	A	F	R	E	L	A	Q	A	L	E	P	L	V	D	G	L	L	V	Y	.	.	.	G	S	N	G	E	G	V	H	L	T	P	E	E	R	A	R	G	L	R	A	L	R	P	R	K	P	F	L	V	G	L	X	E	E	T	L	P	Q	A	E	G	A	L	L	E	A	K	A	A	G	A	X	A
Template Known Secondary structure			B													G	G	G	S	S					T	.	.	.		T	T	T	T	G	G	G	S											T				S	S									S	S															T		S
Template Predicted Secondary structure																										.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.				.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		84	.	.	.	.						.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.						.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure							.	.	.	.	.																													.	.	.	.	.
Query SS confidence							.	.	.	.	.																													.	.	.	.	.
Query Sequence		I	T	L	H	P	.	.	.	.	.	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	.	.	.	.	.	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K
Query Conservation							.	.	.	.	.																													.	.	.	.	.
Alig confidence							.	.	.	.	.																	.												.	.	.	.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																													.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	A	T	P	P	R	Y	Y	H	G	S	L	G	A	G	L	L	R	Y	Y	E	A	L	A	E	.	K	X	P	L	F	L	Y	H	V	P	Q	N	T	K	V	D	L	P	L	E	A	V	E	A	L	A	P	H	.	.	.	.	.	.	.	.	.	.	P	N	V	L	G	I	K	D	S	S	G	D	L	S	R
Template Known Secondary structure									T	T	G	G	G	T	T	T												.		S																								T	T	S	.	.	.	.	.	.	.	.	.	.	T	T								S
Template Predicted Secondary structure																												.																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.											.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L
Query Conservation
Alig confidence									.	.	.	.	.	.										.																								.	.	.	.	.
Template Conservation									.	.	.	.	.	.										.																								.	.	.	.	.
Template Sequence		I	A	F	Y	Q	A	R	.	.	.	.	.	.	L	Q	E	F	R	V	Y	T	G	.	H	A	P	T	F	L	G	A	L	A	L	G	A	E	G	G	I	L	A	A	A	N	L	.	.	.	.	.	A	P	R	A	Y	R	A	L	L	D	H	F	R	E
Template Known Secondary structure									.	.	.	.	.	.		S	S							.		G	G	G							T	T							G	G	G	G	T	.	.	.	.	.														T
Template Predicted Secondary structure									.	.	.	.	.	.										.																								.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.							.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.						200	.	.	.	.	.	.	.	.	.	210	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions