Job Description P32719 Confidence 98.54% Date Thu Jan 5 11:50:42 GMT 2012 Rank 108 Aligned Residues 169 % Identity 17% Template c2fptA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase, mitochondrial; PDBTitle: dual binding mode of a novel series of dhodh inhibitors Resolution 2.40 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Query Sequence		L	L	K	F	K	E	Q	I	E	F	I	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	F	V	S	Q	V	K	K	L	A	T	K	P	L	D	C	H	L	M	.	.	.	.	V	T	R	P	Q	D
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Alig confidence																							.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.
Template Conservation																							.	.	.	.
Template Sequence		A	E	D	Y	A	E	G	V	R	V	L	G	P	L	A	D	Y	L	V	V	N	.	.	.	.	V	S	S	P	N	T	A	G	L	R	S	L	Q	G	K	A	E	L	R	R	L	L	T	K	V	L	Q	E	R	D	G	L	R	R	V	H	R	P	A	V	L	V	K	I	A	P	D	L	T	S	Q	D	K	E	D
Template Known Secondary structure													G	G	G		S						.	.	.	.				T	T	S	T	T	S	G	G	G	G	S																	T	S		G	G	G										S
Template Predicted Secondary structure																							.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L
Query Conservation
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	A	S	V	V	K	E	L	G	I	D	G	L	I	V	T	N	T	T	V	S	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	G	L	Q	G	A	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	T	G	G	L	S	G	K	P	L	R	D	L	S	T
Template Known Secondary structure										T										B	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T				T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	S	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.																			290	.	.	.	.	.	.	.	.																.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L	A
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		Q	T	I	R	E	M	Y	A	L	T	Q	G	R	.	.	V	P	I	I	G	V	G	G	V	S	S	G	Q	D	A	L	E	K	I	R	A	G	A	S	L	V	Q	L	Y	T	A	L	T	F	W	G	P	P	V	V	G	K	V	K	R	E	L	E	A	L	L	K	E
Template Known Secondary structure											T	T	T		.	.	S						S	S			S											T		S					S								T
Template Predicted Secondary structure															.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.			.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions