Job Description P32719 Confidence 71.46% Date Thu Jan 5 11:50:42 GMT 2012 Rank 462 Aligned Residues 137 % Identity 12% Template c2dvzA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of a periplasmic transporter Resolution 2.30 Å

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		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.								.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure																																		.																															.	.	.	.	.	.	.
Query SS confidence																																		.																															.	.	.	.	.	.	.
Query Sequence		F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	.	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	.	.	.	.	.	.	.	P	F	I	P	E	M	L	D	K	L
Query Conservation																																		.																															.	.	.	.	.	.	.
Alig confidence																																		.																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	V	A	V	N	P	K	F	P	A	K	D	F	K	G	F	L	E	E	L	K	K	N	P	G	K	Y	S	Y	G	S	S	G	T	C	G	V	L	H	L	X	G	E	S	F	K	X	A	T	G	T	D	I	V	H	V	P	Y	K	G	S	G	P	A	V	A	D	A	V	G	G	Q	I	E	L	I	F	D	N	L
Template Known Secondary structure							T	T	S	S		S	S										T	S	T	T	T						S		T	T	S														T									S	S											T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																											.	.	.																		.
Query SS confidence																											.	.	.																		.
Query Sequence		A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	.	.	.	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	.	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L	A	A
Query Conservation																											.	.	.																		.
Alig confidence									.																		.	.	.																		.
Template Conservation									.
Template Sequence		P	S	S	X	P	Q	I	.	Q	A	G	K	L	R	A	X	A	I	A	W	P	T	R	I	D	A	I	K	D	V	P	T	F	A	D	A	G	F	P	V	L	N	Q	P	V	W	Y	G	L	L	A	P	K	G	T	P	X	D	V	V	N	K	L	R	D	A	A	V	V	A
Template Known Secondary structure									.		T	T	S	S							S	S	S			G	G	G	T	T	S		B	T	T	T	T	T		G	G	G												T	T
Template Predicted Secondary structure									.
Template SS confidence
		198	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions