Job Description P32719 Confidence 94.28% Date Thu Jan 5 11:50:42 GMT 2012 Rank 321 Aligned Residues 158 % Identity 17% Template c1zlpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:petal death protein; PDBTitle: petal death protein psr132 with cysteine-linked glutaraldehyde forming2 a thiohemiacetal adduct Resolution 2.70 Å

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		46	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.															.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure													.										.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.										.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	F	F	V	S	Q	V	K	K	L	A	.	T	K	P	L	D	C	H	L	M	.	.	.	.	.	V	T	R	P	Q	D	Y	I	A	Q	L	A	R	A	G	A	D	F	I	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H
Query Conservation													.										.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.										.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	E	A	T	R	R	I	T	A	A	A	P	N	L	C	V	V	V	D	G	D	T	G	G	G	G	P	L	N	V	Q	R	F	I	R	E	L	I	S	A	G	A	K	G	V	F	L	E	D	Q	V	W	P	K	K	C	G	H	M	R	G	K	A	V	V	P	A	E	E	H	A	L	K	I	A	A	A	R	E	A
Template Known Secondary structure												S	S	S	S							T	T		S	S	S														T	T									B		S	S				S	S	S	S				B
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
		106	.	.	.	110	.	.	.	.	.	.	.											.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.												.
Query SS confidence														.	.	.	.	.	.	.	.	.	.												.
Query Sequence		D	M	K	V	G	L	I	L	N	P	E	T	.	.	.	.	.	.	.	.	.	.	P	V	E	A	M	K	Y	Y	I	H	K	.	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L	K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G
Query Conservation														.	.	.	.	.	.	.	.	.	.												.
Alig confidence														.	.	.	.	.	.	.	.	.	.												.											.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		I	G	D	S	D	F	F	L	V	A	R	T	D	A	R	A	P	H	G	L	E	E	G	I	R	R	A	N	L	Y	K	E	A	G	A	D	A	T	F	V	E	A	P	A	.	.	.	.	.	.	.	.	.	.	.	N	V	D	E	L	K	E	V	S	A	K	T	K	G	.	L	R	I	A	N	M	I	E	G	G
Template Known Secondary structure			T	T	S										T																			T	T		S									.	.	.	.	.	.	.	.	.	.	.	S											S		S	.								T	T	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.												.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	P	L	H	T	P	E	E	F	K	E	M	G	F	H	L	I	A	H	S	L	T	A	V	Y	A	T	A	R	A	L	V	N	I	M	K	I	L	K	E
Template Known Secondary structure		S	S												T								S
Template Predicted Secondary structure
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions