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Job DescriptionP32719
Confidence96.80%DateThu Jan 5 11:50:42 GMT 2012
Rank252Aligned Residues173
% Identity11%Templatec1ydoC_
PDB info PDB header:lyaseChain: C: PDB Molecule:hmg-coa lyase; PDBTitle: crystal structure of the bacillis subtilis hmg-coa lyase, northeast2 structural genomics target sr181.
Resolution2.71 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.. .......30.........40..... ....50.........60.........70.........80....
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Query Sequence  MCMDLLKFKEQIEFI. DSHADYFHIDIMDGHFVPNLTLS. . PFFVSQVKKLATKPLDCHLMVTRPQDYIAQLARAGADFI
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Template Sequence  VWIATEDKITWINQLSRTGLSYIEI. . . . TSFVHPKWIPALRDAIDVAKGIDREKGVTYAALVPNQRGLENALEGGINEA
Template Known Secondary structure  S


TTT
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   23......30.........40....... ..50.........60.........70.........80.........90........
 
   85....90... ......100.........110...... ...120......... 130......
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Query Sequence  TLHPETING. . . . . . . . . . . . . . . QAFRLIDEIRRHDMKVGLILNPE. . . . . . . . TPVEAMKYYIHKA. . . . . DKITVMT
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Template Sequence  CVFXSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGISELSLG.
Template Known Secondary structure  SSTTT
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BTTTB


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   99100.........110.........120.........130.........140.........150.........160.........170.......
 
   137..140.........150.........160.........170.. .......180.........190..
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Query Sequence  VDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEV. . . . DGSCNQATYEKLMAAGADVF
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Template Sequence  . . . DTIG. . . . AANPAQVETVLEALLARFPANQIALHFHDTRGTALANXVTALQXGITVF
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   178.180. ........190.........200.........210.........220.........230
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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