Job Description P32719 Confidence 99.27% Date Thu Jan 5 11:50:42 GMT 2012 Rank 66 Aligned Residues 187 % Identity 16% Template c1yadD_ PDB info PDB header:transcription Chain: D: PDB Molecule:regulatory protein teni; PDBTitle: structure of teni from bacillus subtilis Resolution 2.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.			.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																					.																																				.	.
Query SS confidence																					.																																				.	.
Query Sequence		M	K	I	S	P	S	L	M	C	M	D	L	L	K	F	K	E	Q	I	.	E	F	I	D	S	H	A	D	Y	F	H	I	D	I	M	D	G	H	F	V	P	N	L	T	L	S	P	F	F	V	S	Q	V	K	K	.	.	L	A	T	K	P	L	D	C	H	L	M	V	T	R	P	Q	D	Y	I	A	Q	L	A
Query Conservation																					.																																				.	.
Alig confidence																					.																			.	.	.	.														.	.										.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.																									.	.	.	.	.	.	.
Template Sequence		M	E	L	H	A	I	T	D	D	S	K	P	V	E	E	L	A	R	I	I	I	T	I	Q	N	E	V	D	F	I	H	I	R	E	R	S	K	S	.	.	.	.	A	A	D	I	L	K	L	L	D	L	I	F	E	G	G	I	D	K	R	K	L	V	M	N	.	.	.	.	.	.	.	G	R	V	D	I	A	L
Template Known Secondary structure										S		S													G	G	G		S							T	T	S		.	.	.	.														T	T			G	G	G					.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																								.	.	.	.																									.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	G	A	D	F	I	T	L	H	P	E	T	I	N	G	Q	A	F	R	L	I	D	E	I	R	R	H	D	M	K	V	G	L	I	L	N	P	E	T	P	V	E	A	M	K	Y	Y	I	H	K	A	D	K	I	T	V	M	T	V	D	P	G	F	A	G	Q	P	F	I	P	E	M	L	D	K	L	A	E	L
Query Conservation
Alig confidence											.	.	.	.																									.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.																									.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	T	I	H	R	V	Q	L	.	.	.	.	P	S	G	S	F	S	P	K	Q	I	R	A	R	F	P	H	L	H	I	G	R	S	V	H	.	.	S	L	E	E	A	V	Q	A	E	K	E	D	A	D	Y	V	L	F	G	H	V	F	R	.	.	.	.	.	.	.	.	.	.	G	V	S	L	L	S	D	I
Template Known Secondary structure		T	T	T							.	.	.	.		T	T	S											T	T									.	.	S										T	T		S										.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.																									.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.					.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.			.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.											.	.	.	.	130	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	W	R	E	R	E	G	L	E	Y	E	I	E	V	D	G	S	C	N	Q	A	T	Y	E	K	L	M	A	A	G	A	D	V	F	I	V	G	T	S	G	L	F	N	H	A	E	N	I	D	E	A	W	R	I	M	T	A	Q	I	L	A	A	K
Query Conservation
Alig confidence						.	.	.	.	.																																		.	.
Template Conservation						.	.	.	.	.																																		.	.
Template Sequence		K	Q	R	I	.	.	.	.	.	S	I	P	V	I	A	I	G	G	M	T	P	D	R	L	R	D	V	K	Q	A	G	A	D	G	I	A	V	M	S	G	I	F	.	.	S	S	A	E	P	L	E	A	A	R	R	Y	S	R	K	L	K	E	M	R
Template Known Secondary structure						.	.	.	.	.		S						S	S			G	G	G							T	T		S					S					.	.	T	S	S	S
Template Predicted Secondary structure						.	.	.	.	.																																		.	.
Template SS confidence
		144	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions