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Job DescriptionP32719
Confidence92.70%DateThu Jan 5 11:50:42 GMT 2012
Rank343Aligned Residues139
% Identity11%Templatec1rr2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:transcarboxylase 5s subunit; PDBTitle: propionibacterium shermanii transcarboxylase 5s subunit bound to 2-2 ketobutyric acid
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   47..50.... .....60........ .70.........80.........90.. .......100.........110...
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Query Sequence  FFVSQVKK. LATKPLDCHLMVTR. . . . . . . . . . . PQDYIAQLARAGADFITLHPETIN. GQAFRLIDEIRRHDMKVGLIL
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Template Sequence  ERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGKHAQGTI
Template Known Secondary structure 
TTS

GGGTTSSS


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   74.....80.........90.........100.........110.........120.........130.........140.........150...
 
   114.... .120.........130.........140.........150.........160...... ...170.. .......180
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Query Sequence  NPETP. . . . . . . . VEAMKYYIHKADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGL. EYEIEV. . . . DGSCNQAT
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Template Sequence  CYTISPVHTVEGYVKLAGQLLDMGADSIALKDMAALLK. . . . . . . PQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVS
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   154.....160.........170.........180.........190. ........200.........210.........220......
 
   181........190..
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Query Sequence  YEKLMAAGADVF
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Template Sequence  LMKAIEAGVDVV
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   227..230........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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