Job Description P52067 Confidence 1.19% Date Thu Jan 5 12:05:08 GMT 2012 Rank 88 Aligned Residues 94 % Identity 12% Template c3rkoM_ PDB info PDB header:oxidoreductase Chain: M: PDB Molecule:nadh-quinone oxidoreductase subunit m; PDBTitle: crystal structure of the membrane domain of respiratory complex i from2 e. coli at 3.0 angstrom resolution Resolution 3.00 Å

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		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	S	L	H	W	T	G	V	L	T	V	I	I	G	F	I	L	A	S	A	F	S	A	I	L	V	Y	A	Q	E	L	L	P	G	R	I	G	M	V	S	G	L	F	F	G	F	A	F	G	M	G	G	L	G	A	A	V	L	G	L	I	A	D	H	T	S	I	E	L	V	Y	K	I	C	A	F	L	P	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	V	E	Y	L	L	M	L	G	F	F	I	A	F	A	V	K	M	P	V	V	P	L	H	G	W	L	P	D	A	H	S	Q	A	P	T	A	G	S	V	D	L	A	G	I	L	L	K	T	A	A	Y	G	L	L	R	F	S	L	P	L	F	P	N	A	S	A	E	F	A	P	I	A	M	W	L	G	V	I
Template Known Secondary structure		T	T																	T	T		S	S	T	T	T									S											T														T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	L	T	I	F	L	P	D	N	R	H	K	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	I	F	Y	G	A	W	M	A	F	A	Q	T	D
Template Known Secondary structure												T		S	B
Template Predicted Secondary structure
Template SS confidence
		297	.	.	300	.	.	.	.	.	.	.	.	.	310

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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