Job Description P52067 Confidence 3.48% Date Thu Jan 5 12:05:08 GMT 2012 Rank 13 Aligned Residues 205 % Identity 11% Template c3b9yA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:ammonium transporter family rh-like protein; PDBTitle: crystal structure of the nitrosomonas europaea rh protein Resolution 1.85 Å

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		T	K	A	R	T	S	F	G	I	L	G	A	I	S	L	S	H	L	L	N	D	M	I	Q	S	L	I	L	A	I	Y	P	L	L	Q	S	E	F	S	L	T	F	M	Q	I	G	M	I	T	L	T	F	Q	L	A	S	S	L	L	Q	P	V	V	G	Y	W	T	D	.	.	K	Y	P	M	P	W	S	L	P	I
Query Conservation																																																																						.	.
Alig confidence																																.	.	.	.	.																																		.	.
Template Conservation																																.	.	.	.	.
Template Sequence		Q	P	I	E	S	D	A	T	S	D	R	F	S	M	L	G	S	M	V	L	W	L	F	W	P	S	F	A	T	A	.	.	.	.	.	I	V	P	F	E	Q	M	P	Q	T	I	V	N	T	L	L	A	L	C	G	A	T	L	A	T	Y	F	L	S	A	L	F	H	K	G	K	A	S	I	V	D	M	A	N	A
Template Known Secondary structure		S																													T	.	.	.	.	.	T	S		G	G	G																											T	T	T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	C	F	T	L	S	G	L	V	L	L	A	L	A	G	S	F	G	A	V	L	L	A	A	A	L	V	G	T	G	S	S	V	F	H	P	E	S	S	R	V	A	R	M	A	S	G	G	R	H	G	L	A	Q	S	I	F	Q	V	G	G	N	F	G	S	S	L	G	P	L	L	A	A	V	I	I	A	P	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	A	G	G	V	A	I	G	S	V	C	N	I	V	G	P	V	G	A	F	V	I	G	L	L	G	G	A	I	S	V	V	G	F	V	F	I	Q	P	M	L	E	S	K	A	K	T	I	D	T	C	G	V	H	N	L	H	G	L	P	G	L	L	G	G	F	S	A	I	L	I	V	P	G	I	A	V	A	Q
Template Known Secondary structure		T	T							T	T	T	T	T	T	S																						T									S					T	T						T	T														S	T	T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	K	G	N	V	A	W	F	V	L	A	A	L	L	A	I	V	V	L	A	Q	I	S	R	W	Y	S	A	Q	H	R	M	N	K	G	K	P	K	A	T	I	I	N	P	L	P	R	N	K	V	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	T	G	I	G	I	T	L	A	L	A	L	I	G	G	V	I	A	G	A	L	I	K	L	T	G	T	T	K	Q	A	Y	E	D	S	H	E	F	I	H	L	A	G	P	E	D	E	H	K	A	E	R
Template Known Secondary structure																									T	T				S	S	T	T		G	G	G	T	S	S	S				G	G	G	T	T
Template Predicted Secondary structure
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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