Job Description P0A9J0 Confidence 96.83% Date Thu Jan 5 11:10:26 GMT 2012 Rank 36 Aligned Residues 83 % Identity 12% Template d1y14b1 SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T	K
Query Conservation
Alig confidence																		.	.									.																									.	.	.	.	.	.	.
Template Conservation																		.	.									.																									.	.	.	.	.	.	.
Template Sequence		P	F	K	G	E	V	V	D	G	T	V	V	S	C	S	Q	.	.	H	G	F	E	V	Q	V	G	.	P	M	K	V	F	V	T	K	H	L	M	P	Q	D	L	T	F	N	A	S	Y	Q	S	S	.	.	.	.	.	.	.	E	D	V	I	T	I	K	S	R	I	R	V	K	I	E	G	C	I	S	Q	V	S
Template Known Secondary structure				T	T												T	.	.	T							T	.	T							G	G	G	S		T	T										S	.	.	.	.	.	.	.	S					T	T														T	T
Template Predicted Secondary structure																		.	.									.																									.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.								.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	R	L	T	T	D	I	T	L	P	S	R	Y	L
Query Conservation
Alig confidence								.	.
Template Conservation								.	.
Template Sequence		S	I	H	A	I	G	.	.	S	I	K	E	D	Y	L
Template Known Secondary structure								.	.				S	T	T
Template Predicted Secondary structure								.	.
Template SS confidence
		156	.	.	.	160	.			.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions