 |
Job Description | P0A9J0 | Confidence | 24.67% | Date | Thu Jan 5 11:10:26 GMT 2012 |
Rank | 127 | Aligned Residues | 52 |
% Identity | 25% | Template | d1x6oa2 |
SCOP info | OB-fold
| Nucleic acid-binding proteins
| Cold shock DNA-binding domain-like
|
Resolution | 1.60 |
|
  |   |
58 | . | 60 | . | . | . | |
|
|
|
. | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
| . | . | . | . |
|
|  |  |  |  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | D | I | G | L | D | . |
. |
. |
. |
K | A | A | F | L | H | A | S | D | I | M | P | H | T | E | C | V | A | G | E | E | Q | K | Q | F | T | V | R | D | I | S | E | L | V | R | Q | G | Q | D | L | M | V | Q | V | V | K |
Query Conservation |   |
|
|
|
|   |   | . | . | . | . |
|   |
|
|
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |
|   |   |
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |
|   |   |
|
|
|
|   |
|
|   |   |   |
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|   |
|   |
|
|
|
Template Sequence |   |
L | D | I | Q | A | N | E | D | P | S | L | P | A | H | L | S | L | M | D | D | E | G | E | S | R | E | D | L | D | M | P | P | D | P | A | L | A | T | Q | I | K | E | Q | F | D | S | G | K | D | V | L | V | V | V | V | S |
Template Known Secondary structure |   |
 |  |  |  |
|
| S | S | T | T | S |
|
|  |  |  |  |  |
| T | T | S |
|  |  |
|
|
| B |
|
| S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
95 | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|