Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9J0
Confidence99.93%DateThu Jan 5 11:10:26 GMT 2012
Rank2Aligned Residues85
% Identity38%Templated1smxa_
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60.........70.........80.........90.........100.........110.........
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Query Sequence  NIYKGRVSRVLPGMQAAFVDIGLDKAAFLHASDIMPHTECVAGEEQKQFTVRDISELVRQGQDLMVQVVKDPLGTKGARL
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Template Sequence  NIYKGKITRIEPSLEAAFVDYGAERHGFLPLKEIAREYF. . . PANYSAHGRPNIKDVLREGQEVIVQIDKEERGNKGAAL
Template Known Secondary structure 

GGGTSSSSS
GGGS
GGG
...SS


SSS


GGGT

TT


BTTB

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   40.........50.........60.........70........ .80.........90.........100.........110......
 
   120.......
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Query Sequence  TTDITLPS
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Template Sequence  TTFISLAG
Template Known Secondary structure  S



TT
Template Predicted Secondary structure 

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   117..120....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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