Job Description P0A9J0 Confidence 97.45% Date Thu Jan 5 11:10:26 GMT 2012 Rank 26 Aligned Residues 86 % Identity 19% Template d1go3e1 SCOP info OB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like Resolution 1.75

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T	K	G	A
Query Conservation
Alig confidence																	.	.							.																		.	.	.
Template Conservation																	.	.							.																		.	.	.
Template Sequence		M	Y	E	L	I	E	G	E	V	V	D	V	V	E	F	.	.	G	S	F	V	R	L	.	G	P	L	D	G	L	I	H	V	S	Q	I	M	D	D	Y	V	.	.	.	S	Y	D	P	K	A	I	I	G	K	E	T	G	K	V	L	E	I	G	D	Y	V	R	A	R	I	V	A	I	S	L	K	A	S	K	I
Template Known Secondary structure		T	T												T	T	.	.							.	S	S	S						G	G	G	S		S	S			.	.	.										T	T	T						T	T
Template Predicted Secondary structure																	.	.							.																		.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.	.	100	.		.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.				.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	T	T	D	I	T	L	P	S	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	T	M	R	Q	P	Y	L	G	K	L
Template Known Secondary structure							S	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions