Job Description P0A9J0 Confidence 62.45% Date Thu Jan 5 11:10:26 GMT 2012 Rank 82 Aligned Residues 62 % Identity 21% Template c3trzE_ PDB info PDB header:rna binding protein/rna Chain: E: PDB Molecule:protein lin-28 homolog a; PDBTitle: mouse lin28a in complex with let-7d microrna pre-element Resolution 2.90 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.
Query Sequence		G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	.	.	.	.	.	.	.	.	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T	K
Query Conservation																					.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	C	K	W	F	N	V	R	M	G	F	G	F	L	S	M	T	A	R	A	G	V	A	L	D	P	P	V	D	V	F	V	H	Q	S	K	L	H	M	E	G	F	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	E	G	E	A	V	E	F	T	F	K	K	S	A	K	G	L	E
Template Known Secondary structure									T	T	T	T										T	T													G	G	G	B			S	S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T											T	T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.																	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		116	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	A	R	L	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	I	R	V	T	G
Template Known Secondary structure							S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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