Job Description P0A9J0 Confidence 96.80% Date Thu Jan 5 11:10:26 GMT 2012 Rank 37 Aligned Residues 78 % Identity 14% Template c3psiA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription elongation factor spt6; PDBTitle: crystal structure of the spt6 core domain from saccharomyces2 cerevisiae, form spt6(239-1451) Resolution 3.30 Å

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		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure
Query SS confidence
Query Sequence		R	E	A	R	R	G	I	V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D
Query Conservation
Alig confidence																								.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	S	E	K	T	F	F	K	G	S	I	I	P	V	R	V	E	R	F	W	H	N	.	.	D	I	I	C	T	T	N	S	E	V	E	C	V	V	N	A	Q	R	H	A	G	A	Q	L	R	R	P	A	N	E	I	.	.	.	.	.	.	.	.	.	.	.	Y	E	I	G	K	T	Y	P	A	K	V	I	Y	I
Template Known Secondary structure				T	T	T	S		T	T												S	S	.	.							T	T	S							T	T	S	S	S	S	T	T	S		S		S	T	T	T	.	.	.	.	.	.	.	.	.	.	.	S		T	T
Template Predicted Secondary structure																								.	.																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1127	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.			.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.												1180	.	.	.	.	.	.	.	.	.	1190	.	.	.
		111	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	G	T	K	G	A	R	L	T	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	Y	A	N	I	T	A	E	V	S	L
Template Known Secondary structure			G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		1194	.	.	.	.	.	1200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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