 |
Job Description | P0A9J0 | Confidence | 72.07% | Date | Thu Jan 5 11:10:26 GMT 2012 |
Rank | 77 | Aligned Residues | 63 |
% Identity | 21% | Template | c3pihA_ |
PDB info |
PDB header:hydrolase/dna | Chain: A: PDB Molecule:uvrabc system protein a; |
PDBTitle: t. maritima uvra in complex with fluorescein-modified dna
|
Resolution | 2.90 Å |
|
 |
  |   |
353 | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 410 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | E | D | H | R | R | R | V | L | H | S | L | E | Q | A | L | S | K | D | R | V | K | T | S | V | N | G | F | S | A | L | G | L | V | E | M | T | R | K | R | T | R | E | S | I | E | H | V | L | C | N | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | C | P | T | C | H | G | R | G | T | V | K |
Query Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |
|
|   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |
|   |
|   |
|   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|   |   |   |
|   |
|   |   |
|   |
|   |
|   |   |   |
Template Sequence |   |
E | T | R | N | E | H | R | I | L | D | S | L | E | L | A | M | R | E | G | K | G | F | V | E | I | R | N | V | D | T | G | E | S | K | I | F | S | E | N | L | M | C | P | V | C | G | I | G | F | P | E | I | T | P | K | L | F | S | F | N | S | P | Y | G | A | C | P | N | C | H | G | L | G | F | T | F |
Template Known Secondary structure |   |
| G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |  |  |  |  |  |  | T | T | T |
|
|  |  |  |  |  | S | S |
| B |
| T | T | T |
|
|
|
|
|
|
| S | G | G | G | G |
| T | T | S | T | T | T | B |
| T | T | T | T | T | S | S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
211 | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|