Job Description P0A9J0 Confidence 96.29% Date Thu Jan 5 11:10:26 GMT 2012 Rank 42 Aligned Residues 89 % Identity 17% Template c3h0gS_ PDB info PDB header:transcription Chain: S: PDB Molecule:dna-directed rna polymerase ii subunit rpb7; PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T
Query Conservation
Alig confidence																				.	.										.																.	.
Template Conservation																				.	.										.																.	.
Template Sequence		R	P	F	R	G	E	V	V	D	A	I	V	T	T	V	N	K	M	.	.	G	F	F	A	N	I	G	P	L	.	N	V	F	V	S	S	H	L	V	P	P	D	M	K	F	.	.	D	P	T	A	N	P	P	N	Y	S	G	E	D	Q	V	I	E	K	G	S	N	V	R	L	K	I	V	G	T	R	T	D	A
Template Known Secondary structure					T	T												T	T	.	.						B	T	T	B	.						G	G	G	S		T	T				.	.	B	S	S	S	S	S		B			S	S	S					S	S													S	S
Template Predicted Secondary structure																				.	.										.																.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.			.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	A	R	L	T	T	D	I	T	L	P	S	R	Y	L
Query Conservation
Alig confidence									.	.
Template Conservation									.	.
Template Sequence		T	E	I	F	A	I	A	.	.	T	M	K	E	D	Y	L
Template Known Secondary structure		S							.	.				S	T	T
Template Predicted Secondary structure									.	.
Template SS confidence
		156	.	.	.	160	.	.			.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions