Job Description P0A9J0 Confidence 64.92% Date Thu Jan 5 11:10:26 GMT 2012 Rank 81 Aligned Residues 62 % Identity 23% Template c3camB_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:cold-shock domain family protein; PDBTitle: crystal structure of the cold shock domain protein from neisseria2 meningitidis Resolution 2.60 Å

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	.	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T	K	G	A	R	L	T	T
Query Conservation																					.
Alig confidence																					.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	I	V	K	W	F	N	D	A	K	G	F	G	F	I	T	P	D	E	G	G	E	D	L	F	A	H	F	S	A	I	N	X	E	G	F	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	E	G	Q	R	V	S	F	D	V	T	T	G	P	K	G	K	Q	A	A	N	I	Q	A
Template Known Secondary structure									T	T	T	T							S	S	S								G	G	G			G	G	G	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T											T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions