Job Description P0A9J0 Confidence 80.23% Date Thu Jan 5 11:10:26 GMT 2012 Rank 71 Aligned Residues 91 % Identity 10% Template c3ayhB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-directed rna polymerase iii subunit rpc8; PDBTitle: crystal structure of the c17/25 subcomplex from s. pombe rna2 polymerase iii Resolution 2.19 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.
Query Sequence		R	G	I	V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	.	.	.	.	.	.	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V
Query Conservation																																																				.	.	.	.	.	.
Alig confidence																			.	.																																.	.	.	.	.	.
Template Conservation																			.	.
Template Sequence		R	P	F	R	G	E	V	M	L	G	K	I	K	S	C	S	E	.	.	E	G	I	R	V	T	I	S	F	F	D	D	I	F	I	P	K	D	M	L	F	D	P	C	V	F	R	P	D	E	R	A	W	V	W	K	I	E	G	E	D	G	S	E	G	T	E	L	Y	F	D	I	D	E	E	I	R	F	Q	I	E
Template Known Secondary structure					T	T												T	.	.	T							S	S								G	G	G	B		T	T					G	G	G	T										T	T	S									T	T
Template Predicted Secondary structure																			.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.			.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		109	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		K	D	P	L	G	T	K	G	A	.	R	L	T	T	D	I	T	L	P	S
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		S	E	D	F	V	D	V	S	P	Y	T	L	I	A	S	C	S	R	D	G
Template Known Secondary structure										S							B		S	T	T
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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