Job Description P0A9J0 Confidence 82.44% Date Thu Jan 5 11:10:26 GMT 2012 Rank 68 Aligned Residues 69 % Identity 23% Template c3a0jB_ PDB info PDB header:transcription Chain: B: PDB Molecule:cold shock protein; PDBTitle: crystal structure of cold shock protein 1 from thermus2 thermophilus hb8 Resolution 1.65 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T	K	G	A	R	L	T	T	D
Query Conservation
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		K	G	R	V	K	W	F	N	A	E	K	G	Y	G	F	I	E	R	E	G	D	T	D	V	F	V	H	Y	T	A	I	N	A	K	G	F	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	N	E	G	D	I	V	T	F	D	V	E	P	.	G	R	N	G	K	G	P	Q	A	V	N	V
Template Known Secondary structure										T	T	T	T							T	T	S							G	G	G	B			S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T										.			T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.
		123	.	.		.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		I	T	L	.	P	S	R
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		T	V	V	E	P	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		66	.	.	.	70	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions