Job Description P0A9J0 Confidence 59.61% Date Thu Jan 5 11:10:26 GMT 2012 Rank 84 Aligned Residues 55 % Identity 27% Template c2ytvA_ PDB info PDB header:rna binding protein Chain: A: PDB Molecule:cold shock domain-containing protein e1; PDBTitle: solution structure of the fifth cold-shock domain of the human2 kiaa0885 protein (unr protein) Resolution UNK

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.			.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																				.	.
Query SS confidence																				.	.
Query Sequence		I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	.	.	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T	K
Query Conservation																				.	.
Alig confidence														.	.					.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	R	R	A	T	V	E	C	V	K	D	Q	.	.	F	G	F	I	N	Y	E	V	G	D	S	K	K	L	F	F	H	V	K	E	V	Q	D	G	I	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Q	A	G	D	E	V	E	F	S	V	I	L	N	Q	R	T	G	K
Template Known Secondary structure		B										S	S	.	.					S				S	S	S	S	S					T	T	T			S	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T						B					S	S	S
Template Predicted Secondary structure														.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.																			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions