Job Description P0A9J0 Confidence 42.98% Date Thu Jan 5 11:10:26 GMT 2012 Rank 97 Aligned Residues 86 % Identity 13% Template c2rf4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:dna-directed rna polymerase i subunit rpa4; PDBTitle: crystal structure of the rna polymerase i subcomplex a14/43 Resolution 3.10 Å

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		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	I	V	G	N	I	Y	K	G	R	V	S	R	V	L	P	G	M	Q	A	A	F	V	D	I	G	L	D	K	A	A	F	L	H	A	S	D	I	M	P	H	T	E	C	V	A	G	E	E	Q	K	Q	F	T	V	R	D	I	S	E	L	V	R	Q	G	Q	D	L	M	V	Q	V	V	K	D	P	L	G	T
Query Conservation
Alig confidence																				.	.																																								.
Template Conservation																				.	.																																								.
Template Sequence		Q	P	Q	V	G	D	V	L	E	G	Y	I	F	I	Q	S	A	S	.	.	H	I	G	L	L	I	H	D	A	F	N	A	S	I	K	K	N	N	I	P	V	D	W	T	F	V	H	N	D	G	N	S	L	G	H	W	V	D	S	.	N	G	E	P	I	D	G	K	L	R	F	T	V	R	N	V	H	T	T	G
Template Known Secondary structure					T	T												S	S	.	.							T	T	T							S	T	T	S		S	S		B					S								B		S	.	S			B			S													S
Template Predicted Secondary structure																				.	.																																								.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.			.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		115	.	.	.	.	120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	G	A	R	L	T	T	D	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	V	S	V	D	G	T	L
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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